BLASTX nr result

ID: Coptis21_contig00019862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019862
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...   263   3e-68
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]   262   6e-68
ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...   261   1e-67
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...   261   1e-67
ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   259   5e-67

>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
           gi|297738532|emb|CBI27777.3| unnamed protein product
           [Vitis vinifera]
          Length = 493

 Score =  263 bits (671), Expect = 3e-68
 Identities = 127/183 (69%), Positives = 147/183 (80%), Gaps = 2/183 (1%)
 Frame = +2

Query: 170 MVETFTFGRFY--NQRPELKRLIPAFISSYRTLFAILWIVGFGSLFMWQRDNVDRFWIFK 343
           MVET +FGRF+  + RP+LKR IPAF+SS+RTLF ILWI  F S+F+WQR+ V+    F+
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60

Query: 344 TVQENPFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWL 523
                P P LRP ++NLTDFGG GD  T+NT+AFER ++AI+KL KKGGGQLNVPAG WL
Sbjct: 61  RAPARPLPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWL 120

Query: 524 TAPFNLTSHMTLFLSEGAVILAVQDEKYWPLMPPLPSYGYGRERPGPRYCSLIHGQNLKD 703
           TAPFNLTSHMTLFL + AVIL +QDEKYWPLMPPLPSYGYGRE  G RY SLIHGQNLKD
Sbjct: 121 TAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKD 180

Query: 704 VDI 712
           V I
Sbjct: 181 VVI 183


>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
          Length = 509

 Score =  262 bits (669), Expect = 6e-68
 Identities = 126/181 (69%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
 Frame = +2

Query: 170 MVETFTFGRFY--NQRPELKRLIPAFISSYRTLFAILWIVGFGSLFMWQRDNVDRFWIFK 343
           MVET +FGRF+  + RP+LKR IPAF+SS+RTLF ILWI  F S+F+WQR+ V+    F+
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60

Query: 344 TVQENPFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWL 523
                P P LRP ++NLTDFGG GD  T+NT+AFER ++AI+KL KKGGGQLNVPAG WL
Sbjct: 61  RAPARPLPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAISKLGKKGGGQLNVPAGNWL 120

Query: 524 TAPFNLTSHMTLFLSEGAVILAVQDEKYWPLMPPLPSYGYGRERPGPRYCSLIHGQNLKD 703
           TAPFNLTSHMTLFL + AVIL +QDEKYWPLMPPLPSYGYGRE  G RY SLIHGQNLKD
Sbjct: 121 TAPFNLTSHMTLFLDQDAVILGIQDEKYWPLMPPLPSYGYGREHRGARYGSLIHGQNLKD 180

Query: 704 V 706
           V
Sbjct: 181 V 181


>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score =  261 bits (667), Expect = 1e-67
 Identities = 121/182 (66%), Positives = 145/182 (79%)
 Frame = +2

Query: 167 IMVETFTFGRFYNQRPELKRLIPAFISSYRTLFAILWIVGFGSLFMWQRDNVDRFWIFKT 346
           +MVET T G F++QR +L+R +PAF +S++TL  +LWI  F S+F+WQR+ V  F ++  
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGG 60

Query: 347 VQENPFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLT 526
           +   P P+LRP  FNLTDFGG GDG TLNT+AFER V+A++K  KKGG QLNVP G WLT
Sbjct: 61  IPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLT 120

Query: 527 APFNLTSHMTLFLSEGAVILAVQDEKYWPLMPPLPSYGYGRERPGPRYCSLIHGQNLKDV 706
           APFNLTSHMTLFL+E AVIL + DEKYWPLMPPLPSYGYGRE PGPRY SLIHGQ+LKDV
Sbjct: 121 APFNLTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDV 180

Query: 707 DI 712
            I
Sbjct: 181 VI 182


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score =  261 bits (667), Expect = 1e-67
 Identities = 121/182 (66%), Positives = 145/182 (79%)
 Frame = +2

Query: 167 IMVETFTFGRFYNQRPELKRLIPAFISSYRTLFAILWIVGFGSLFMWQRDNVDRFWIFKT 346
           +MVET T G F++QR +L+R +PAF +S++TL  +LWI  F S+F+WQR+ V  F ++  
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGG 60

Query: 347 VQENPFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYWLT 526
           +   P P+LRP  FNLTDFGG GDG TLNT+AFER V+A++K  KKGG QLNVP G WLT
Sbjct: 61  IPGRPMPMLRPMAFNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVPPGRWLT 120

Query: 527 APFNLTSHMTLFLSEGAVILAVQDEKYWPLMPPLPSYGYGRERPGPRYCSLIHGQNLKDV 706
           APFNLTSHMTLFL+E AVIL + DEKYWPLMPPLPSYGYGRE PGPRY SLIHGQ+LKDV
Sbjct: 121 APFNLTSHMTLFLAEDAVILGIDDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQHLKDV 180

Query: 707 DI 712
            I
Sbjct: 181 VI 182


>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score =  259 bits (661), Expect = 5e-67
 Identities = 126/184 (68%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
 Frame = +2

Query: 167 IMVETFTFGRFYNQRPELKRLIPAFISSYRTLFAILWIVGFGSLFMWQRDNV-DRFWIF- 340
           +M+ET + GR + QR ELKR +P F SS++TLF +LWI  F S+F+WQR+ V D F +F 
Sbjct: 1   MMLETASLGRLHYQRLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQRNVVGDGFAVFF 60

Query: 341 KTVQENPFPVLRPFLFNLTDFGGKGDGTTLNTKAFERGVAAIAKLRKKGGGQLNVPAGYW 520
           K     P P LRP  FNLTDFGG GDG TLNT+AFER V AI+KL KKGGGQLNVP G W
Sbjct: 61  KASPMRPMPKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVPPGRW 120

Query: 521 LTAPFNLTSHMTLFLSEGAVILAVQDEKYWPLMPPLPSYGYGRERPGPRYCSLIHGQNLK 700
           +TAPFNLTSHMTLFL+E ++IL ++DEKYWPLMPPLPSYGYGRE PGPRY SLIHGQNLK
Sbjct: 121 VTAPFNLTSHMTLFLAEDSIILGIEDEKYWPLMPPLPSYGYGREHPGPRYGSLIHGQNLK 180

Query: 701 DVDI 712
           DV I
Sbjct: 181 DVVI 184


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