BLASTX nr result

ID: Coptis21_contig00019820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019820
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305182.1| predicted protein [Populus trichocarpa] gi|2...   132   1e-28
gb|EEE54660.1| hypothetical protein OsJ_01944 [Oryza sativa Japo...   128   2e-27
gb|EEC70725.1| hypothetical protein OsI_02109 [Oryza sativa Indi...   128   2e-27
gb|ABK93752.1| unknown [Populus trichocarpa]                          128   2e-27
ref|XP_003577150.1| PREDICTED: uncharacterized protein LOC100846...   127   4e-27

>ref|XP_002305182.1| predicted protein [Populus trichocarpa] gi|222848146|gb|EEE85693.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  132 bits (333), Expect = 1e-28
 Identities = 70/105 (66%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
 Frame = +2

Query: 287 RGNAETLKARSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRH 460
           R   E LK +S   A E S   D    ILKCKSVYKCRICPRI+CLTEE++R+HL+SKRH
Sbjct: 78  RTGIEILKKQSNATADEESLPDDIPDCILKCKSVYKCRICPRIICLTEETMRAHLSSKRH 137

Query: 461 ARSEKLLKEGRLKFMLNSDGEIEE-DQETHAERYARTMTIAQVSS 592
           ARSEKL+KE RLK MLNSDGEIE  D+ETHAER+ART+ +AQ  S
Sbjct: 138 ARSEKLMKENRLKVMLNSDGEIENLDEETHAERHARTVALAQGKS 182


>gb|EEE54660.1| hypothetical protein OsJ_01944 [Oryza sativa Japonica Group]
          Length = 262

 Score =  128 bits (322), Expect = 2e-27
 Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 4/100 (4%)
 Frame = +2

Query: 296 AETLKARSKKLAKENSS--EADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRHA 463
           A + KA S K A +     E D+  +ILKCKSVYKC++CPRI+CL EE +R HL SKRHA
Sbjct: 119 ASSGKADSTKDASDTDDALEVDFNNYILKCKSVYKCKLCPRIICLNEEMVRVHLKSKRHA 178

Query: 464 RSEKLLKEGRLKFMLNSDGEIEEDQETHAERYARTMTIAQ 583
           RS+KLL EGRLK MLNSDGE+EE+QETHAER+ART+ +AQ
Sbjct: 179 RSKKLLGEGRLKLMLNSDGELEEEQETHAERHARTVALAQ 218


>gb|EEC70725.1| hypothetical protein OsI_02109 [Oryza sativa Indica Group]
          Length = 262

 Score =  128 bits (322), Expect = 2e-27
 Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 4/100 (4%)
 Frame = +2

Query: 296 AETLKARSKKLAKENSS--EADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRHA 463
           A + KA S K A +     E D+  +ILKCKSVYKC++CPRI+CL EE +R HL SKRHA
Sbjct: 119 ASSGKADSTKDASDTDDALEVDFNNYILKCKSVYKCKLCPRIICLNEEMVRVHLKSKRHA 178

Query: 464 RSEKLLKEGRLKFMLNSDGEIEEDQETHAERYARTMTIAQ 583
           RS+KLL EGRLK MLNSDGE+EE+QETHAER+ART+ +AQ
Sbjct: 179 RSKKLLGEGRLKLMLNSDGELEEEQETHAERHARTVALAQ 218


>gb|ABK93752.1| unknown [Populus trichocarpa]
          Length = 247

 Score =  128 bits (322), Expect = 2e-27
 Identities = 65/95 (68%), Positives = 78/95 (82%), Gaps = 3/95 (3%)
 Frame = +2

Query: 308 KARSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRHARSEKLL 481
           K +S  +A + S   D    ILKCKSVYKCRICPRI+CLTEE++R+HLNSKRH+RS+KL+
Sbjct: 106 KKQSNIMANKESVPDDIQDCILKCKSVYKCRICPRIICLTEETMRAHLNSKRHSRSKKLM 165

Query: 482 KEGRLKFMLNSDGEIEE-DQETHAERYARTMTIAQ 583
           KE RLK MLNSDGEIE  DQETHAER+ART+ +AQ
Sbjct: 166 KENRLKVMLNSDGEIENMDQETHAERHARTLALAQ 200


>ref|XP_003577150.1| PREDICTED: uncharacterized protein LOC100846143 [Brachypodium
           distachyon]
          Length = 279

 Score =  127 bits (320), Expect = 4e-27
 Identities = 66/107 (61%), Positives = 83/107 (77%), Gaps = 9/107 (8%)
 Frame = +2

Query: 290 GNAETLKARS------KKLAKENSS-EADY--FILKCKSVYKCRICPRIVCLTEESLRSH 442
           GN    KA S      K  AKE+ + E D+  +ILKCKSVYKC++CPRI+CL+EE +R H
Sbjct: 105 GNLPVKKASSCNTDCAKDAAKEDDAIEVDFNNYILKCKSVYKCKLCPRIMCLSEEMVRVH 164

Query: 443 LNSKRHARSEKLLKEGRLKFMLNSDGEIEEDQETHAERYARTMTIAQ 583
           L SKRHARS+KLL EGRLK MLNSDGE++E++ETHAER+ART+ +AQ
Sbjct: 165 LESKRHARSKKLLGEGRLKLMLNSDGELQEEEETHAERHARTIALAQ 211


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