BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019812
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [S...   234   1e-59
gb|AFW56940.1| plastid transcriptionally active 12-like protein ...   231   1e-58
ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group] g...   230   2e-58
gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indi...   230   2e-58
ref|XP_004165731.1| PREDICTED: pentatricopeptide repeat-containi...   225   5e-57

>ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
           gi|241940341|gb|EES13486.1| hypothetical protein
           SORBIDRAFT_07g005470 [Sorghum bicolor]
          Length = 602

 Score =  234 bits (597), Expect = 1e-59
 Identities = 118/169 (69%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
 Frame = +1

Query: 175 AIQSHTLLSFSSNLSKAKVLENLSI--PKIEIHRRIKVVSLGMLAPRKFMQRKKKVEVFK 348
           AI S + LSF S+L KAKV   L I   KI+ + R++VV  GMLA RKFMQRKKK EVFK
Sbjct: 5   AIGSQSPLSFPSSLCKAKVSSGLPIYNVKIKSNHRLEVVCRGMLATRKFMQRKKKEEVFK 64

Query: 349 DAEDEANQKNWRKLMREIDEVGSAVSILRSQRIKNQALPRDLVLGTLVRFKQLRKWNLVS 528
           DA DEA Q NWR++MREI+E GSAV IL++QR     LPRD++LGTLVRFKQL+KWN+VS
Sbjct: 65  DAADEAEQMNWRRMMREIEEAGSAVPILKTQRSGKGPLPRDVILGTLVRFKQLKKWNIVS 124

Query: 529 EILEWLRTQHWWDFNEMDFMMLIIAYGKQGDFNRAERVLGYMNKKGYPP 675
           EILEWLRTQHWWDF+EMDF+ML+ AYGK GDF+RAERVL YMNKKGY P
Sbjct: 125 EILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQP 173


>gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
          Length = 600

 Score =  231 bits (588), Expect = 1e-58
 Identities = 114/169 (67%), Positives = 138/169 (81%), Gaps = 2/169 (1%)
 Frame = +1

Query: 175 AIQSHTLLSFSSNLSKAKVLENLSI--PKIEIHRRIKVVSLGMLAPRKFMQRKKKVEVFK 348
           AI S + LSF S+L K KV  +LSI   KI+ + R++VV  GMLA RKFMQRKKK EVFK
Sbjct: 5   AIGSQSPLSFPSSLCKGKVSSSLSIYNVKIKSNCRLEVVCHGMLATRKFMQRKKKEEVFK 64

Query: 349 DAEDEANQKNWRKLMREIDEVGSAVSILRSQRIKNQALPRDLVLGTLVRFKQLRKWNLVS 528
           D  DE  Q NWR++MREI++ GSAV IL++QR + + LPRD++LGTL+RFKQL+KWN+VS
Sbjct: 65  DGADETEQMNWRRMMREIEQEGSAVPILKTQRNRKEPLPRDVILGTLIRFKQLKKWNIVS 124

Query: 529 EILEWLRTQHWWDFNEMDFMMLIIAYGKQGDFNRAERVLGYMNKKGYPP 675
           EILEWLRTQHWWDF+EMDF+ML+ AYGK GDF+RAERVL YMNKKGY P
Sbjct: 125 EILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQP 173


>ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
           gi|40253652|dbj|BAD05595.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza
           sativa Japonica Group] gi|125602452|gb|EAZ41777.1|
           hypothetical protein OsJ_26318 [Oryza sativa Japonica
           Group] gi|215695295|dbj|BAG90486.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215704436|dbj|BAG93870.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 609

 Score =  230 bits (587), Expect = 2e-58
 Identities = 114/162 (70%), Positives = 135/162 (83%), Gaps = 2/162 (1%)
 Frame = +1

Query: 196 LSFSSNLSKAKVLENLSIPKIEIH--RRIKVVSLGMLAPRKFMQRKKKVEVFKDAEDEAN 369
           LSFSS+L  AKV   L++  ++I   RR++VV  GML  RKFMQ+KKK EV+KDA DEA 
Sbjct: 14  LSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKKKEEVYKDAADEAE 73

Query: 370 QKNWRKLMREIDEVGSAVSILRSQRIKNQALPRDLVLGTLVRFKQLRKWNLVSEILEWLR 549
           QKNWR +MREI+E GSAVSIL++QR K + LPRD VLGTL+RFKQL+KWNLVSEILEWLR
Sbjct: 74  QKNWRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLKKWNLVSEILEWLR 133

Query: 550 TQHWWDFNEMDFMMLIIAYGKQGDFNRAERVLGYMNKKGYPP 675
           TQHWW+F+EMDF+ML+ AYGK GDF+RAERVL YMNKKGY P
Sbjct: 134 TQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKP 175


>gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
          Length = 608

 Score =  230 bits (587), Expect = 2e-58
 Identities = 114/162 (70%), Positives = 135/162 (83%), Gaps = 2/162 (1%)
 Frame = +1

Query: 196 LSFSSNLSKAKVLENLSIPKIEIH--RRIKVVSLGMLAPRKFMQRKKKVEVFKDAEDEAN 369
           LSFSS+L  AKV   L++  ++I   RR++VV  GML  RKFMQ+KKK EV+KDA DEA 
Sbjct: 14  LSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKKKEEVYKDAADEAE 73

Query: 370 QKNWRKLMREIDEVGSAVSILRSQRIKNQALPRDLVLGTLVRFKQLRKWNLVSEILEWLR 549
           QKNWR +MREI+E GSAVSIL++QR K + LPRD VLGTL+RFKQL+KWNLVSEILEWLR
Sbjct: 74  QKNWRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLKKWNLVSEILEWLR 133

Query: 550 TQHWWDFNEMDFMMLIIAYGKQGDFNRAERVLGYMNKKGYPP 675
           TQHWW+F+EMDF+ML+ AYGK GDF+RAERVL YMNKKGY P
Sbjct: 134 TQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKP 175


>ref|XP_004165731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g59040-like, partial [Cucumis sativus]
          Length = 303

 Score =  225 bits (574), Expect = 5e-57
 Identities = 105/155 (67%), Positives = 128/155 (82%)
 Frame = +1

Query: 211 NLSKAKVLENLSIPKIEIHRRIKVVSLGMLAPRKFMQRKKKVEVFKDAEDEANQKNWRKL 390
           N SK +   +     + + R++ V  +GML PRKF+Q++KK+EVFKD  DEA QKNWR+L
Sbjct: 17  NWSKLQAQTHSISSNVNVRRKLVVTCMGMLTPRKFLQKRKKLEVFKDEADEAEQKNWRRL 76

Query: 391 MREIDEVGSAVSILRSQRIKNQALPRDLVLGTLVRFKQLRKWNLVSEILEWLRTQHWWDF 570
           M EI+E GSAVS+LRS+RIKN+A+P+DLVLGTLVRFKQL+KWNLVSEILEWLRTQ WW+F
Sbjct: 77  MNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNLVSEILEWLRTQSWWNF 136

Query: 571 NEMDFMMLIIAYGKQGDFNRAERVLGYMNKKGYPP 675
           +EMDF+MLI AYGK GDFNRAE+VL  MNKKGY P
Sbjct: 137 SEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAP 171