BLASTX nr result

ID: Coptis21_contig00019810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019810
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29877.3| unnamed protein product [Vitis vinifera]              654   0.0  
ref|XP_002277596.1| PREDICTED: uncharacterized protein LOC100267...   654   0.0  
ref|XP_002308967.1| predicted protein [Populus trichocarpa] gi|2...   645   0.0  
ref|XP_004161484.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   627   e-177
ref|XP_004136589.1| PREDICTED: uncharacterized protein LOC101206...   624   e-176

>emb|CBI29877.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  654 bits (1688), Expect = 0.0
 Identities = 296/426 (69%), Positives = 340/426 (79%), Gaps = 7/426 (1%)
 Frame = +3

Query: 33   KMMSTVQTWKCSWXXXXXXXXXXXXXXXXHLFLFPLVPSSFSNLSARQIQNSSFP-NNGL 209
            +M   +Q WKCSW                HLFLFPL PS     S  Q Q +  P N  +
Sbjct: 28   EMTFFLQKWKCSWSLLATVASVVALISVAHLFLFPLAPS-LEYFSMGQGQKTCTPINASI 86

Query: 210  SG------EVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTDRTVNIVERIG 371
             G       + P  +LDH+FPADSH +VVY GAPWKAEIGRW SGCDS    V+I+E+IG
Sbjct: 87   RGVDHDGKNLQPSFDLDHRFPADSHKSVVYRGAPWKAEIGRWFSGCDSIAAEVSIIEKIG 146

Query: 372  GKTCKSDCSGQGVCNQEVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPSGPWIVSICPA 551
            GK CK+DCSGQG+CN E+G CRCFHGFSGEGCSERL L+CN P SPEQP GPW+VSICPA
Sbjct: 147  GKDCKNDCSGQGICNHELGQCRCFHGFSGEGCSERLHLDCNYPSSPEQPYGPWVVSICPA 206

Query: 552  YCDTTRAMCFCGQGTKYPNRPVAEACGFQINLPSENGGPKLTDWAKADLDNIFTTNTSRP 731
             CDTTRAMCFCG+GTKYP+RPVAEACGFQ+NLP+  G PKL DW KADLDNIFTTN S+P
Sbjct: 207  SCDTTRAMCFCGEGTKYPHRPVAEACGFQMNLPTTPGDPKLVDWTKADLDNIFTTNDSKP 266

Query: 732  GWCNVDPIEAYASKVKFKEECDCKYDCHVGRFCEVPVQCSCINQCSGHGYCRGGFCQCHS 911
            GWCNVDP EAYA K+++KEECDCKYDC +GRFCE+PV C+C+NQCSGHG+CRGGFCQCH 
Sbjct: 267  GWCNVDPTEAYALKMQYKEECDCKYDCLLGRFCEIPVLCTCVNQCSGHGHCRGGFCQCHR 326

Query: 912  DWYGTDCSIPSASSSVQEWPQWLRPATIHVPDNAHLTADHVNIDTVVEKKRPLIYVYDLP 1091
             WYGTDCSIPS  SSV+EWP+WLRPA + VPD+ HL+   VN+D VV+KKRPLIYVYDLP
Sbjct: 327  GWYGTDCSIPSVLSSVREWPRWLRPAHVEVPDDMHLSGSLVNLDAVVKKKRPLIYVYDLP 386

Query: 1092 PEFNSHLLEGRHFRFECVNRIYIEQNATLWTDQLYGSQMALYESILASPFRTLNGEEADY 1271
            PEFNS LLEGRHF+FECVNRIY ++NAT WT+QLYG+QMA+YESILASP RTL+GEEAD+
Sbjct: 387  PEFNSLLLEGRHFKFECVNRIYDDRNATYWTEQLYGAQMAIYESILASPHRTLDGEEADF 446

Query: 1272 FFVPVL 1289
            FFVPVL
Sbjct: 447  FFVPVL 452


>ref|XP_002277596.1| PREDICTED: uncharacterized protein LOC100267584 [Vitis vinifera]
          Length = 794

 Score =  654 bits (1687), Expect = 0.0
 Identities = 295/421 (70%), Positives = 338/421 (80%), Gaps = 7/421 (1%)
 Frame = +3

Query: 48   VQTWKCSWXXXXXXXXXXXXXXXXHLFLFPLVPSSFSNLSARQIQNSSFP-NNGLSG--- 215
            +Q WKCSW                HLFLFPL PS     S  Q Q +  P N  + G   
Sbjct: 5    LQKWKCSWSLLATVASVVALISVAHLFLFPLAPS-LEYFSMGQGQKTCTPINASIRGVDH 63

Query: 216  ---EVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTDRTVNIVERIGGKTCK 386
                + P  +LDH+FPADSH +VVY GAPWKAEIGRW SGCDS    V+I+E+IGGK CK
Sbjct: 64   DGKNLQPSFDLDHRFPADSHKSVVYRGAPWKAEIGRWFSGCDSIAAEVSIIEKIGGKDCK 123

Query: 387  SDCSGQGVCNQEVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPSGPWIVSICPAYCDTT 566
            +DCSGQG+CN E+G CRCFHGFSGEGCSERL L+CN P SPEQP GPW+VSICPA CDTT
Sbjct: 124  NDCSGQGICNHELGQCRCFHGFSGEGCSERLHLDCNYPSSPEQPYGPWVVSICPASCDTT 183

Query: 567  RAMCFCGQGTKYPNRPVAEACGFQINLPSENGGPKLTDWAKADLDNIFTTNTSRPGWCNV 746
            RAMCFCG+GTKYP+RPVAEACGFQ+NLP+  G PKL DW KADLDNIFTTN S+PGWCNV
Sbjct: 184  RAMCFCGEGTKYPHRPVAEACGFQMNLPTTPGDPKLVDWTKADLDNIFTTNDSKPGWCNV 243

Query: 747  DPIEAYASKVKFKEECDCKYDCHVGRFCEVPVQCSCINQCSGHGYCRGGFCQCHSDWYGT 926
            DP EAYA K+++KEECDCKYDC +GRFCE+PV C+C+NQCSGHG+CRGGFCQCH  WYGT
Sbjct: 244  DPTEAYALKMQYKEECDCKYDCLLGRFCEIPVLCTCVNQCSGHGHCRGGFCQCHRGWYGT 303

Query: 927  DCSIPSASSSVQEWPQWLRPATIHVPDNAHLTADHVNIDTVVEKKRPLIYVYDLPPEFNS 1106
            DCSIPS  SSV+EWP+WLRPA + VPD+ HL+   VN+D VV+KKRPLIYVYDLPPEFNS
Sbjct: 304  DCSIPSVLSSVREWPRWLRPAHVEVPDDMHLSGSLVNLDAVVKKKRPLIYVYDLPPEFNS 363

Query: 1107 HLLEGRHFRFECVNRIYIEQNATLWTDQLYGSQMALYESILASPFRTLNGEEADYFFVPV 1286
             LLEGRHF+FECVNRIY ++NAT WT+QLYG+QMA+YESILASP RTL+GEEAD+FFVPV
Sbjct: 364  LLLEGRHFKFECVNRIYDDRNATYWTEQLYGAQMAIYESILASPHRTLDGEEADFFFVPV 423

Query: 1287 L 1289
            L
Sbjct: 424  L 424


>ref|XP_002308967.1| predicted protein [Populus trichocarpa] gi|222854943|gb|EEE92490.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score =  645 bits (1665), Expect = 0.0
 Identities = 295/425 (69%), Positives = 338/425 (79%), Gaps = 8/425 (1%)
 Frame = +3

Query: 39   MSTVQTWKCSWXXXXXXXXXXXXXXXXHLFLFPLVPSSFSNLSARQIQNSSFPNN-GLSG 215
            M T+  WKCSW                HLFLFP+VPS F   S  Q+Q+S  PNN  + G
Sbjct: 1    MITISKWKCSWSLMATIASIVALVSVVHLFLFPVVPS-FDPFSVWQVQDSCGPNNESVDG 59

Query: 216  EVG-------PPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTDRTVNIVERIGG 374
              G       P  +L+HKFPAD H AV Y  APWKAEIGRWLSGCD+  + V++VE I G
Sbjct: 60   RTGHDPGNLQPVLDLEHKFPADLHRAVFYRNAPWKAEIGRWLSGCDAVTKEVSVVETISG 119

Query: 375  KTCKSDCSGQGVCNQEVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPSGPWIVSICPAY 554
            ++CK+DCSGQGVCN E+G CRCFHGFSGEGCSERL LECN P SPE P G W+VSIC A+
Sbjct: 120  RSCKNDCSGQGVCNYELGQCRCFHGFSGEGCSERLHLECNYPKSPELPYGRWVVSICSAH 179

Query: 555  CDTTRAMCFCGQGTKYPNRPVAEACGFQINLPSENGGPKLTDWAKADLDNIFTTNTSRPG 734
            CD TRAMCFCG+GTKYPNRP AE CGFQ++LPSE G P+  DWAK DLD I+TTN S+ G
Sbjct: 180  CDPTRAMCFCGEGTKYPNRPAAETCGFQLSLPSEIGAPRQVDWAKPDLD-IYTTNKSKLG 238

Query: 735  WCNVDPIEAYASKVKFKEECDCKYDCHVGRFCEVPVQCSCINQCSGHGYCRGGFCQCHSD 914
            WCNVDP E YA+KVKFKEECDCKYDC  GRFCEVPVQCSCINQCSGHG+CRGGFCQC + 
Sbjct: 239  WCNVDPAEGYANKVKFKEECDCKYDCLSGRFCEVPVQCSCINQCSGHGHCRGGFCQCANG 298

Query: 915  WYGTDCSIPSASSSVQEWPQWLRPATIHVPDNAHLTADHVNIDTVVEKKRPLIYVYDLPP 1094
            WYGTDCSIPS +SSV+EWP+WLRPA + VPDNAHLT   V+++ VV+KKRPLIY+YDLPP
Sbjct: 299  WYGTDCSIPSVTSSVREWPRWLRPAQLDVPDNAHLTGKLVDLNAVVKKKRPLIYIYDLPP 358

Query: 1095 EFNSHLLEGRHFRFECVNRIYIEQNATLWTDQLYGSQMALYESILASPFRTLNGEEADYF 1274
            +FNS LLEGRHF+FECVNR+Y + NAT+WTDQLYG+QMALYESILASP+RTLNGEEAD+F
Sbjct: 359  KFNSLLLEGRHFKFECVNRLYNDNNATIWTDQLYGAQMALYESILASPYRTLNGEEADFF 418

Query: 1275 FVPVL 1289
            FVPVL
Sbjct: 419  FVPVL 423


>ref|XP_004161484.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226446
            [Cucumis sativus]
          Length = 859

 Score =  627 bits (1618), Expect = e-177
 Identities = 281/425 (66%), Positives = 326/425 (76%), Gaps = 8/425 (1%)
 Frame = +3

Query: 39   MSTVQTWKCSWXXXXXXXXXXXXXXXXHLFLFPLVPSSFSNLSARQIQNSSFP------- 197
            M+  Q W CSW                HLF FPLVPS   NL  R+  NS F        
Sbjct: 1    MAFAQKWNCSWSLGASIASIIGLVTVVHLFFFPLVPS-LDNL--RRFPNSGFAVNVSTEA 57

Query: 198  -NNGLSGEVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTDRTVNIVERIGG 374
             NN    +  PP +L HKFP DSHNAVVYHGAPWK+ IG+WLSGCD+  + + IVE +GG
Sbjct: 58   YNNHAKEDPAPPIDLTHKFPPDSHNAVVYHGAPWKSHIGQWLSGCDANTKDLQIVELVGG 117

Query: 375  KTCKSDCSGQGVCNQEVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPSGPWIVSICPAY 554
              CK+DC+GQGVCN E G CRCFHG+SGEGCSE++ LECN PGS  +P GPW+VSIC A+
Sbjct: 118  SGCKNDCNGQGVCNYEFGQCRCFHGYSGEGCSEKVNLECNHPGSEGEPYGPWVVSICSAH 177

Query: 555  CDTTRAMCFCGQGTKYPNRPVAEACGFQINLPSENGGPKLTDWAKADLDNIFTTNTSRPG 734
            CDTTRAMCFCG+GTKYPNRPVAEACGFQ+  PSE  G K+TDW KADLDNIFTTN S+ G
Sbjct: 178  CDTTRAMCFCGEGTKYPNRPVAEACGFQMRPPSEPNGSKVTDWTKADLDNIFTTNGSKSG 237

Query: 735  WCNVDPIEAYASKVKFKEECDCKYDCHVGRFCEVPVQCSCINQCSGHGYCRGGFCQCHSD 914
            WCNVDP EAYASKV+FKEECDCKYDC +GRFCE+PV C+CINQCSGHG+C GGFCQC+  
Sbjct: 238  WCNVDPAEAYASKVQFKEECDCKYDCSLGRFCELPVSCTCINQCSGHGHCMGGFCQCNEG 297

Query: 915  WYGTDCSIPSASSSVQEWPQWLRPATIHVPDNAHLTADHVNIDTVVEKKRPLIYVYDLPP 1094
            WYG DCSIPS  +SV+EWPQWL PA I +PD  H+T    N+  +V K+RPLIY+YDLPP
Sbjct: 298  WYGVDCSIPSVQTSVREWPQWLLPARIDIPDRLHITEKSFNLKPMVNKRRPLIYIYDLPP 357

Query: 1095 EFNSHLLEGRHFRFECVNRIYIEQNATLWTDQLYGSQMALYESILASPFRTLNGEEADYF 1274
             FNS LL+GRH++FECVNR+Y E+NAT+WTD LYG++MA YESILASP RTLNGEEAD+F
Sbjct: 358  GFNSQLLQGRHWKFECVNRMYNERNATMWTDDLYGAEMAFYESILASPHRTLNGEEADFF 417

Query: 1275 FVPVL 1289
            FVPVL
Sbjct: 418  FVPVL 422


>ref|XP_004136589.1| PREDICTED: uncharacterized protein LOC101206674 [Cucumis sativus]
          Length = 791

 Score =  624 bits (1610), Expect = e-176
 Identities = 280/425 (65%), Positives = 325/425 (76%), Gaps = 8/425 (1%)
 Frame = +3

Query: 39   MSTVQTWKCSWXXXXXXXXXXXXXXXXHLFLFPLVPSSFSNLSARQIQNSSFP------- 197
            M+  Q W CSW                HLF FPLVPS   NL  R+  NS F        
Sbjct: 1    MAFAQKWNCSWSLGASIASIIGLVTVVHLFFFPLVPS-LDNL--RRFPNSGFAVNVSTEA 57

Query: 198  -NNGLSGEVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTDRTVNIVERIGG 374
             NN    +  P  +L HKFP DSHNAVVYHGAPWK+ IG+WLSGCD+  + + IVE +GG
Sbjct: 58   YNNHAKEDPAPAIDLTHKFPPDSHNAVVYHGAPWKSHIGQWLSGCDANTKDLQIVELVGG 117

Query: 375  KTCKSDCSGQGVCNQEVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPSGPWIVSICPAY 554
              CK+DC+GQGVCN E G CRCFHG+SGEGCSE++ LECN PGS  +P GPW+VSIC A+
Sbjct: 118  SGCKNDCNGQGVCNYEFGQCRCFHGYSGEGCSEKVNLECNHPGSEGEPYGPWVVSICSAH 177

Query: 555  CDTTRAMCFCGQGTKYPNRPVAEACGFQINLPSENGGPKLTDWAKADLDNIFTTNTSRPG 734
            CDTTRAMCFCG+GTKYPNRPVAEACGFQ+  PSE  G K+TDW KADLDNIFTTN S+ G
Sbjct: 178  CDTTRAMCFCGEGTKYPNRPVAEACGFQMRPPSEPNGSKVTDWTKADLDNIFTTNGSKSG 237

Query: 735  WCNVDPIEAYASKVKFKEECDCKYDCHVGRFCEVPVQCSCINQCSGHGYCRGGFCQCHSD 914
            WCNVDP EAYASKV+FKEECDCKYDC +GRFCE+PV C+CINQCSGHG+C GGFCQC+  
Sbjct: 238  WCNVDPAEAYASKVQFKEECDCKYDCSLGRFCELPVSCTCINQCSGHGHCMGGFCQCNEG 297

Query: 915  WYGTDCSIPSASSSVQEWPQWLRPATIHVPDNAHLTADHVNIDTVVEKKRPLIYVYDLPP 1094
            WYG DCSIPS  +SV+EWPQWL PA I +PD  H+T    N+  +V K+RPLIY+YDLPP
Sbjct: 298  WYGVDCSIPSVQTSVREWPQWLLPARIDIPDRLHITEKSFNLKPMVNKRRPLIYIYDLPP 357

Query: 1095 EFNSHLLEGRHFRFECVNRIYIEQNATLWTDQLYGSQMALYESILASPFRTLNGEEADYF 1274
             FNS LL+GRH++FECVNR+Y E+NAT+WTD LYG++MA YESILASP RTLNGEEAD+F
Sbjct: 358  GFNSQLLQGRHWKFECVNRMYNERNATMWTDDLYGAEMAFYESILASPHRTLNGEEADFF 417

Query: 1275 FVPVL 1289
            FVPVL
Sbjct: 418  FVPVL 422


Top