BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019792
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   283   5e-74
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   259   8e-67
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...   229   9e-58
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   224   4e-56

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  283 bits (725), Expect = 5e-74
 Identities = 153/351 (43%), Positives = 219/351 (62%), Gaps = 12/351 (3%)
 Frame = +2

Query: 2    AKSLGQFKCVCKPWCAQINEPEFIKTHLNHVNKAXXXXXXXXRGC----YLDSIENN--N 163
            AK L   + V KPWCA I+ P F+K HL H            R      Y+D  +N   N
Sbjct: 18   AKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTSHVHYMDFEQNLVLN 77

Query: 164  D--ELKTVDYPYKTSNGGVDVLGSCNGLVCISTLEDVFVIWNITTKEYKKVPETPIEFPG 337
            D   LK +++P    N G+ VLGS NGL+CIS + D   +WN +T++++ VP  PIE   
Sbjct: 78   DCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKR 137

Query: 338  GWGI--CRTILYGFGYDHNIDDYKLLRIVNFYGDGD-DFESEVKVYTLGTNAWKRVEDVR 508
             +G   C   ++GFGYD   DDYKL+RI  F G G   FESEVKVY+L   +W+R+ D+ 
Sbjct: 138  YFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMP 197

Query: 509  YHILYKRVIGVFVSGALHWVATRKPESDFSKVVVAFDLVDEVFKEVPQPDYEDDEFHMNV 688
            Y + Y    GVF +GALHWV    PES+ + +VVA DL  E ++EV QP+Y+D  F++++
Sbjct: 198  YCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDL 257

Query: 689  GVLGGCLCVLSNFCKVRFDVWVMMDYGVKDSWTKLFTISQTSVIGSFDFVRPLCYWRSG- 865
            GVL GCLC L+NF   R DVW+M +YGVK+SWTKLF+++Q  VIG    ++PL Y +SG 
Sbjct: 258  GVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGD 317

Query: 866  EIVLEKDSKELILYDVKSGKAKNLVACGLPGHFETETYLGSLVSLNTGTYV 1018
            E+++E D+ +L  YD+K  + KN +  G+P  FE +T++ SL+S++   ++
Sbjct: 318  EVLIEHDNLDLCWYDLKRKQVKNRIP-GIPYSFEADTFVESLISVSPNRHL 367


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  259 bits (663), Expect = 8e-67
 Identities = 139/339 (41%), Positives = 207/339 (61%), Gaps = 5/339 (1%)
 Frame = +2

Query: 2    AKSLGQFKCVCKPWCAQINEPEFIKTHLNHVNKAXXXXXXXXRGCYLDSIENNN-DELKT 178
            AK L   +CV K W   I+ P FI  HLNH  ++        +   L S+  +  D ++ 
Sbjct: 18   AKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILKSSELYSLSFDLLDNIQP 77

Query: 179  VDYPYKTSNGGVDVLGSCNGLVCISTLEDVFVIWNITTKEYKKVPETPIEFPGGWGIC-- 352
            +D+P    N GV +LGSCNGL+CI  + D   +WN + + ++ VP  P+E    +G+C  
Sbjct: 78   LDHPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSC 137

Query: 353  RTILYGFGYDHNIDDYKLLRIVNFYG-DGDDFESEVKVYTLGTNAWKRVEDVRYHILYKR 529
            R  ++GFGYD + DDYKL+RI  F G D   FESEVKV++L  N+W+R+ D+ Y +LY  
Sbjct: 138  RVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPG 197

Query: 530  VIGVFVSGALHWVATRKPESDFSKVVVAFDLVDEVFKEVPQPDYEDDEFHMNVGVLGGCL 709
              G++ +GALHW+ ++ P+S  +  +VA DL  E +  VP+P++ D   +M VGVL GCL
Sbjct: 198  ENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNMGVGVLQGCL 257

Query: 710  CVLSNFCKVRFDVWVMMDYGVKDSWTKLFTISQTSVIGSFDFVRPLCYWRSG-EIVLEKD 886
             +L+     R DVWVM +Y VK+SW+KLF++++  VIG    ++PL Y +SG E+++E D
Sbjct: 258  SLLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSKSGNEVLIEHD 317

Query: 887  SKELILYDVKSGKAKNLVACGLPGHFETETYLGSLVSLN 1003
            +  L  YD+K  +  N+   G+P  FE E  +GSLV LN
Sbjct: 318  NVNLFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVPLN 356


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  249 bits (635), Expect = 1e-63
 Identities = 145/361 (40%), Positives = 210/361 (58%), Gaps = 26/361 (7%)
 Frame = +2

Query: 5    KSLGQFKCVCKPWCAQINEPEFIKTHLNHVNKAXXXXXXXXRGCY------LDSIENNND 166
            KSL +F+CV K WC +I+ P FI THL   ++A        R         LDS +  + 
Sbjct: 18   KSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNLCTVDLDSPDFTSI 77

Query: 167  ELKTVDYPYKTSNGGVDVLGSCNGLVCISTLEDVFVIWNITTKEYKKVPETPIEFPGGWG 346
            ELK  + P K+ +   +V+GSCNGL+ +   +    ++N +T+E K +P +P+E P    
Sbjct: 78   ELK--NNPLKSDDCATEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVSPLELPNDLD 135

Query: 347  ICRTI----LYGFGYDHNIDDYKLLRIVNFYGDGDD--FESEVKVYTLGTNAWKRVEDVR 508
              +       YGFG+D   +DYK++R ++FYGD  D  F  EVKVY+L +N+WKR++D  
Sbjct: 136  DSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYP 195

Query: 509  YHILY----------KRVIGVFVSGALHWVAT--RKPESDFSKVVVAFDLVDEVFKEVPQ 652
            Y + +          +R  GVF + A+HW AT   K + + S ++VAFDL  E FK +PQ
Sbjct: 196  YDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQ 255

Query: 653  PDYEDDEFHMNVGVLGGCLCVLSNFCKVRFDVWVMMDYGVKDSWTKLFT-ISQTSVIGSF 829
            PDY  +E  MNVGVLGGCLCV  N    + ++WVM +YGVK+SWT L T I+Q  V   +
Sbjct: 256  PDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWTHLCTVIAQLQVKAFW 315

Query: 830  DFVRPLCYWRSGE-IVLEKDSKELILYDVKSGKAKNLVACGLPGHFETETYLGSLVSLNT 1006
               RPL Y + G+ I+LE D++  + YD++  K+K +   G P  F  E  +GSLV+LN 
Sbjct: 316  LHARPLAYSKGGDKILLELDNRFFVWYDLRRRKSKIIRIRGAPPIFIAEICVGSLVTLNG 375

Query: 1007 G 1009
            G
Sbjct: 376  G 376


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  229 bits (585), Expect = 9e-58
 Identities = 138/365 (37%), Positives = 203/365 (55%), Gaps = 23/365 (6%)
 Frame = +2

Query: 5    KSLGQFKCVCKPWCAQINEPEFIKTHLNH--VNKAXXXXXXXXRGCYLDSIENNNDELKT 178
            KSL +F+ + KP C+ I+ P FI  HLNH    K+           +    +  +D ++ 
Sbjct: 19   KSLVRFRSLSKPICSLIDGPNFINLHLNHSITTKSNHSIILKEWDLFAVDFDALSDAVEV 78

Query: 179  VDYPYKTSNGGVDVLGSCNGLVCISTLEDVFVIWNITTKEYKKVPETPIEFPGGWGICRT 358
              +P   S GG +V+GS NGLV +   E    ++N++T+E KK      E P        
Sbjct: 79   KHHPLY-SGGGTEVIGSVNGLVFLRRSETNIAVYNLSTRECKKCYVAETEIPRRDMTTGY 137

Query: 359  ILYGFGYDHNIDDYKLLRIVNFY-----GDGDDF--ESEVKVYTLGTNAWKRVEDVR--- 508
            + YGFGYD   DDYK++R+  F      GDG     E EVKVY+L  + WK++E +    
Sbjct: 138  VYYGFGYDSYGDDYKVVRMAQFVREDGGGDGGGLGCEYEVKVYSLKNDKWKKIEGLPIRL 197

Query: 509  -------YHILYKRVIGVFVSGALHWVATRKPESDFSKVVVAFDLVDEVFKEVPQPDYED 667
                   +HIL +R  GVF   ALHW+  ++ E      V+ FD+ D+ F E+PQPDYE+
Sbjct: 198  RLLSKPFFHILNRRGYGVFAGHALHWIVPQRRELGIRDCVLGFDIRDDKFFELPQPDYEN 257

Query: 668  D--EFHMNVGVLGGCLCVLSNFCKVRFDVWVMMDYGVKDSWTKLFTISQTSVIGSFDFVR 841
                FH++VGVL G LCV+ N+  V  DVWVM +YGVK+SW K+F++     I +F F+R
Sbjct: 258  KGMNFHVDVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWCKMFSVHAIKWISAFMFLR 317

Query: 842  PLCYWRSGEIV-LEKDSKELILYDVKSGKAKNLVACGLPGHFETETYLGSLVSLNTGTYV 1018
            PL Y + G++V LE + ++L+ YD K+  AK +   G P  F +E Y+ SL+ +N G  +
Sbjct: 318  PLVYSKGGDMVLLEVNGEKLLWYDWKNKHAKVVRVRGGPSSFGSEMYVESLIRINDGDRI 377

Query: 1019 -WQIQ 1030
             W+ Q
Sbjct: 378  GWKKQ 382


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
            gi|223527542|gb|EEF29664.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  224 bits (571), Expect = 4e-56
 Identities = 125/358 (34%), Positives = 198/358 (55%), Gaps = 23/358 (6%)
 Frame = +2

Query: 5    KSLGQFKCVCKPWCAQINEPEFIKTHLNHVNKAXXXXXXXXRGCYL-----DSIENNNDE 169
            K+L +F+C+ KP C+ I+ P+FI  HL+H  K         R   L     DS+ + +  
Sbjct: 19   KALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLILRDWNLYTLDFDSLSSVSPA 78

Query: 170  LKTVDYPYKTSNGGVDVLGSCNGLVCISTLEDVFVIWNITTKEYKKVPETPIEFPGGWGI 349
               V        GG + +GSCNGL+ +   E    ++N  T++YK+VP + IE P     
Sbjct: 79   AADVLIHPLQKGGGTEAVGSCNGLLALRNSERDLALYNPATRKYKRVPVSEIEPPDRNSK 138

Query: 350  CRTILYGFGYDHNIDDYKLLRIVNFYGDGD-----DFESEVKVYTLGTNAWKRVEDVRYH 514
               + YGFG+D   +DY+L+R+  F G+ D     D+E +V+VY+L  ++WKR++ + Y+
Sbjct: 139  TGYVFYGFGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIKGLPYY 198

Query: 515  ----------ILYKRVIGVFVSGALHWVATRKPESDFSKVVVAFDLVDEVFKEVPQPDYE 664
                      +L++R  GVF   ALHWV    PE   +  ++AFD+V+E F++VPQP++ 
Sbjct: 199  LRFLYKPFFQVLHRRGYGVFACNALHWVMPHWPELGVNNSIIAFDIVNETFQQVPQPNWS 258

Query: 665  DDE--FHMNVGVLGGCLCVLSNFCKVRFDVWVMMDYGVKDSWTKLFTISQTSVIGSFDFV 838
            D++  F ++ GVL G LC + N      D+WVM +YGVK+SW KLF+   +  + +  F+
Sbjct: 259  DNQLNFQVDAGVLEGRLCAMCNCGHECIDLWVMEEYGVKESWIKLFSFRLSKSMSNLMFL 318

Query: 839  RPLCYWRSGE-IVLEKDSKELILYDVKSGKAKNLVACGLPGHFETETYLGSLVSLNTG 1009
            RPLCY +  E ++LE +  +L+ YD      + +   G P  F     +GSLV L+ G
Sbjct: 319  RPLCYSKDREKMLLEVNDHKLVWYDWNKTSVRTVKVKGGPRSFGAAMCVGSLVPLDDG 376