BLASTX nr result

ID: Coptis21_contig00019789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019789
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti...   125   5e-27
ref|NP_001058586.1| Os06g0715600 [Oryza sativa Japonica Group] g...   124   6e-27
ref|XP_004136379.1| PREDICTED: BRCA1-A complex subunit BRE-like ...   124   8e-27
gb|AFW69500.1| hypothetical protein ZEAMMB73_230497 [Zea mays]        123   2e-26
ref|NP_001149020.1| protein BRE [Zea mays] gi|194702686|gb|ACF85...   123   2e-26

>ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
           gi|302142670|emb|CBI19873.3| unnamed protein product
           [Vitis vinifera]
          Length = 375

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/78 (71%), Positives = 66/78 (84%)
 Frame = -1

Query: 273 VFTFLVHFSLSTQFPKQQPALVLQSSQHFNSQGTPVMSPPLIDYPWSPRWDVSKMAERIF 94
           VFT LVHF L TQFPKQQP L+LQSSQHFNSQG P+ S  L +YPWSPRW+ S+MAERI 
Sbjct: 297 VFTCLVHFFLPTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERIL 356

Query: 93  DFLVEECLEFKKYCNDAR 40
           +FLV+ECL FKK+CN+A+
Sbjct: 357 EFLVDECLNFKKFCNEAQ 374


>ref|NP_001058586.1| Os06g0715600 [Oryza sativa Japonica Group]
           gi|53791784|dbj|BAD53578.1| putative brain and
           reproductive organ-expressed protein [Oryza sativa
           Japonica Group] gi|113596626|dbj|BAF20500.1|
           Os06g0715600 [Oryza sativa Japonica Group]
           gi|215734968|dbj|BAG95690.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765259|dbj|BAG86956.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636227|gb|EEE66359.1| hypothetical protein
           OsJ_22662 [Oryza sativa Japonica Group]
          Length = 388

 Score =  124 bits (312), Expect = 6e-27
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = -1

Query: 273 VFTFLVHFSLSTQFPKQQPALVLQSSQHFNSQGTPVMSPPLIDYPWSPRWDVSKMAERIF 94
           +FTFLVHF +  QFPK QP L L+SSQHFN+QG P+MS P+ DYPWSPRWD ++M ERI+
Sbjct: 307 IFTFLVHFVIPLQFPKHQPVLTLESSQHFNAQGLPIMSAPVNDYPWSPRWDPTEMVERIY 366

Query: 93  DFLVEECLEFKKYCNDARHQQ 31
           DFLV+EC  FKK+C+D+  QQ
Sbjct: 367 DFLVDECQTFKKFCSDSIPQQ 387


>ref|XP_004136379.1| PREDICTED: BRCA1-A complex subunit BRE-like [Cucumis sativus]
           gi|449505768|ref|XP_004162564.1| PREDICTED: BRCA1-A
           complex subunit BRE-like [Cucumis sativus]
          Length = 380

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/80 (68%), Positives = 67/80 (83%)
 Frame = -1

Query: 273 VFTFLVHFSLSTQFPKQQPALVLQSSQHFNSQGTPVMSPPLIDYPWSPRWDVSKMAERIF 94
           VFTFLVH  +STQFPK+QP+LVLQSSQHFNSQG P+ S  + DYPWSPRW+  +MAERIF
Sbjct: 300 VFTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIF 359

Query: 93  DFLVEECLEFKKYCNDARHQ 34
           +FL +E L FK+YCN+A+ Q
Sbjct: 360 EFLADEALSFKRYCNEAQLQ 379


>gb|AFW69500.1| hypothetical protein ZEAMMB73_230497 [Zea mays]
          Length = 413

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/81 (64%), Positives = 65/81 (80%)
 Frame = -1

Query: 273 VFTFLVHFSLSTQFPKQQPALVLQSSQHFNSQGTPVMSPPLIDYPWSPRWDVSKMAERIF 94
           +FTFLVHF++  QFPKQQP + LQSSQH N+ G P+ SPP+ DYPWSPRWD ++M ERI+
Sbjct: 332 MFTFLVHFAIPLQFPKQQPVVTLQSSQHCNADGMPITSPPINDYPWSPRWDQAEMVERIY 391

Query: 93  DFLVEECLEFKKYCNDARHQQ 31
           DFL +EC  FKK+C+DA  QQ
Sbjct: 392 DFLTDECQNFKKFCSDAITQQ 412


>ref|NP_001149020.1| protein BRE [Zea mays] gi|194702686|gb|ACF85427.1| unknown [Zea
           mays] gi|195624028|gb|ACG33844.1| protein BRE [Zea mays]
           gi|413934952|gb|AFW69503.1| protein BRE [Zea mays]
          Length = 393

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/81 (64%), Positives = 65/81 (80%)
 Frame = -1

Query: 273 VFTFLVHFSLSTQFPKQQPALVLQSSQHFNSQGTPVMSPPLIDYPWSPRWDVSKMAERIF 94
           +FTFLVHF++  QFPKQQP + LQSSQH N+ G P+ SPP+ DYPWSPRWD ++M ERI+
Sbjct: 312 MFTFLVHFAIPLQFPKQQPVVTLQSSQHCNADGMPITSPPINDYPWSPRWDQAEMVERIY 371

Query: 93  DFLVEECLEFKKYCNDARHQQ 31
           DFL +EC  FKK+C+DA  QQ
Sbjct: 372 DFLTDECQNFKKFCSDAITQQ 392


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