BLASTX nr result

ID: Coptis21_contig00019785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019785
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143708.1| PREDICTED: uncharacterized protein LOC101208...   235   3e-60
ref|XP_002510820.1| conserved hypothetical protein [Ricinus comm...   234   7e-60
ref|XP_002274057.2| PREDICTED: uncharacterized protein LOC100245...   232   2e-59
ref|NP_680759.1| Ubiquitin carboxyl-terminal hydrolase family pr...   228   4e-58
ref|XP_003549111.1| PREDICTED: uncharacterized protein LOC100782...   215   3e-54

>ref|XP_004143708.1| PREDICTED: uncharacterized protein LOC101208717 [Cucumis sativus]
           gi|449520006|ref|XP_004167025.1| PREDICTED:
           uncharacterized protein LOC101232053 [Cucumis sativus]
          Length = 428

 Score =  235 bits (599), Expect = 3e-60
 Identities = 113/150 (75%), Positives = 133/150 (88%)
 Frame = -3

Query: 473 STSIPKKQQRTKDHGFDNYMEVYKKIRKVLKFQDLILSQQNHTMSITRLDAIARRLGFKQ 294
           STSIPK  QR +DHG+DNYMEV KK RKVLKFQ+LILSQ N T+ ++RLD +ARRLGFKQ
Sbjct: 4   STSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQ 63

Query: 293 FEAGAFLLKFPHVFEIFEHPVQRILYCRLTRKAVMQIHQEKQALEEQIPDAIMRIRKLLM 114
            EAGAF+LKFPHVFEI+EHPVQRILYCRLTRKA +QI Q+K+A+  QIPDA+ R+RKLLM
Sbjct: 64  HEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLM 123

Query: 113 LSNNGRVRLEHIRIARRDFGLPEDFEYSAL 24
           +SNNGR+RLEHIRIAR +FGLP+DFEYS +
Sbjct: 124 MSNNGRLRLEHIRIARSEFGLPDDFEYSVV 153


>ref|XP_002510820.1| conserved hypothetical protein [Ricinus communis]
           gi|223549935|gb|EEF51422.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 432

 Score =  234 bits (596), Expect = 7e-60
 Identities = 108/150 (72%), Positives = 133/150 (88%)
 Frame = -3

Query: 473 STSIPKKQQRTKDHGFDNYMEVYKKIRKVLKFQDLILSQQNHTMSITRLDAIARRLGFKQ 294
           STSIPKKQQR +DHG+DNYME+ KK RKVLKFQ LILSQ N T++I+RL+ +ARRLG KQ
Sbjct: 4   STSIPKKQQRVRDHGYDNYMEIEKKTRKVLKFQSLILSQINQTLTISRLETLARRLGCKQ 63

Query: 293 FEAGAFLLKFPHVFEIFEHPVQRILYCRLTRKAVMQIHQEKQALEEQIPDAIMRIRKLLM 114
           +EAG F+LKFPH+FE++EHPVQR+LYCRLTRKA++QI QEK+AL  QIP A+MR+RKL+M
Sbjct: 64  YEAGTFILKFPHIFEVYEHPVQRVLYCRLTRKALLQIQQEKEALIAQIPTAVMRLRKLIM 123

Query: 113 LSNNGRVRLEHIRIARRDFGLPEDFEYSAL 24
           +SN GR+RLEH+RIAR  FGLP+DFEYS +
Sbjct: 124 MSNTGRLRLEHVRIARSAFGLPDDFEYSVV 153


>ref|XP_002274057.2| PREDICTED: uncharacterized protein LOC100245174 [Vitis vinifera]
          Length = 457

 Score =  232 bits (592), Expect = 2e-59
 Identities = 109/150 (72%), Positives = 131/150 (87%)
 Frame = -3

Query: 473 STSIPKKQQRTKDHGFDNYMEVYKKIRKVLKFQDLILSQQNHTMSITRLDAIARRLGFKQ 294
           STSIPKK QR +DHG+DNYMEV KK+RK+LKFQDL L Q + T+ ++RLD +ARRL FKQ
Sbjct: 31  STSIPKKLQRVRDHGYDNYMEVEKKLRKILKFQDLFLCQPHQTLPVSRLDTLARRLDFKQ 90

Query: 293 FEAGAFLLKFPHVFEIFEHPVQRILYCRLTRKAVMQIHQEKQALEEQIPDAIMRIRKLLM 114
            EAGAF+LKFPHVFEI+EHPV+RILYCRLTRKA +QI QE +AL +QIPDA+ R+RKLLM
Sbjct: 91  HEAGAFILKFPHVFEIYEHPVRRILYCRLTRKAHLQIEQENRALNDQIPDAVTRLRKLLM 150

Query: 113 LSNNGRVRLEHIRIARRDFGLPEDFEYSAL 24
           +SN GR+RLEHIRIARR+ GLP+DFEYS +
Sbjct: 151 MSNTGRLRLEHIRIARRELGLPDDFEYSVI 180


>ref|NP_680759.1| Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           thaliana] gi|51850389|dbj|BAD42412.1| plant-specific
           family protein RPD1 [Arabidopsis thaliana]
           gi|332660835|gb|AEE86235.1| Ubiquitin carboxyl-terminal
           hydrolase family protein [Arabidopsis thaliana]
          Length = 409

 Score =  228 bits (581), Expect = 4e-58
 Identities = 110/152 (72%), Positives = 131/152 (86%), Gaps = 2/152 (1%)
 Frame = -3

Query: 473 STSIPKKQQRTKDHGFDNYMEVYKKIRKVLKFQDLILSQQNHTMSITRLDAIARRLG--F 300
           ST+IPKKQ R +DHG+DNYMEV KKIRKV+KF  LILSQ NHT++I+ LD +ARRLG  F
Sbjct: 37  STTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGF 96

Query: 299 KQFEAGAFLLKFPHVFEIFEHPVQRILYCRLTRKAVMQIHQEKQALEEQIPDAIMRIRKL 120
           KQ E GAFLLKFPHVFEI+EHPVQRILYCRLTRKA+ QI  E +A+ +QIPDA+ R+RKL
Sbjct: 97  KQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKL 156

Query: 119 LMLSNNGRVRLEHIRIARRDFGLPEDFEYSAL 24
           +M+SN GR+RLEH+RIAR +FGLPEDFEYS +
Sbjct: 157 VMMSNTGRIRLEHVRIARTEFGLPEDFEYSVI 188


>ref|XP_003549111.1| PREDICTED: uncharacterized protein LOC100782167 [Glycine max]
          Length = 462

 Score =  215 bits (547), Expect = 3e-54
 Identities = 100/150 (66%), Positives = 130/150 (86%)
 Frame = -3

Query: 473 STSIPKKQQRTKDHGFDNYMEVYKKIRKVLKFQDLILSQQNHTMSITRLDAIARRLGFKQ 294
           ST+IPKKQ R +DHG+DNYMEV KK RKVLKFQ+LILS+ + ++ I+RL+ +ARR GF +
Sbjct: 36  STAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQNLILSEPSQSLPISRLETLARRFGFTR 95

Query: 293 FEAGAFLLKFPHVFEIFEHPVQRILYCRLTRKAVMQIHQEKQALEEQIPDAIMRIRKLLM 114
            E+GAF+LKFPHVFEIFEHPVQRIL+CRLTRKA++QI QE++AL  ++P A+ R+RKLLM
Sbjct: 96  HESGAFVLKFPHVFEIFEHPVQRILFCRLTRKAILQIEQERRALAAELPRAVTRLRKLLM 155

Query: 113 LSNNGRVRLEHIRIARRDFGLPEDFEYSAL 24
           +SN+GR+RLEH+RIAR  +GLP+DFE S +
Sbjct: 156 MSNHGRLRLEHVRIARAAYGLPDDFENSVV 185


Top