BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019784
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    97   3e-18
ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    97   6e-18
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    97   6e-18
ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-...    93   6e-17
ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group] g...    92   1e-16

>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
 Frame = +3

Query: 219 SRAWKDLDKDVLITIYQKLGINDLIV-GAPLCCTSWYNVSKDPSVWKNVNCRG-VFDTHK 392
           SR W +L  D+L+ I  ++G+ DL+  GA   C+SW   ++DP  W+ V+ R  V  T  
Sbjct: 6   SRPWAELQHDLLVAIVARVGVPDLLSGGASRACSSWRAAARDPLAWRRVDLRDWVALTSG 65

Query: 393 GKAVEPSQ-------------LIKFVIARSQGCLTSITFPSNASVDDLLLLSERCHRLEH 533
            +A  P               +++     ++G + ++  P  A  D LL L+ERC  L++
Sbjct: 66  RRAARPGHSSSRVPVHAALFGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLQY 125

Query: 534 ICLKISERTVLEGKTAIDKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-C 710
             L  +  T         K+IG L  L+ M VDE  I+ D  L  V +CCP+F++LKV  
Sbjct: 126 FSLPSTCMTY----DQFCKAIGGLHSLKGMAVDETLINYD-VLLHVHQCCPDFVELKVSA 180

Query: 711 NSVCKNTALLIATFLPKLKILDISSTNI 794
             V +  A +I   LP+LK L+I S ++
Sbjct: 181 LYVDEEMASVICNSLPRLKKLEIPSADM 208


>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 16/208 (7%)
 Frame = +3

Query: 219 SRAWKDLDKDVLITIYQKLGINDLIVG-APLCCTSWYNVSKDPSVWKNVNCRG-VFDTHK 392
           SR+W +L  D+L++I  ++G  DL+ G A   C+SW   ++DP  W+ V+ R  V  T  
Sbjct: 6   SRSWAELQHDLLVSIMTRVGAPDLLWGGASRACSSWRAAARDPLAWRRVDLRDWVALTSG 65

Query: 393 GKAVEPSQ-------------LIKFVIARSQGCLTSITFPSNASVDDLLLLSERCHRLEH 533
            +A  P               +++     ++G + ++  P  A  D LL L+ERC  L +
Sbjct: 66  RRAARPGHSSSRVPVHAALVGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLHY 125

Query: 534 ICLKISERTVLEGKTAIDKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-C 710
             L  +  T         K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV  
Sbjct: 126 FSLPSTCMTY----DQFCKAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSA 180

Query: 711 NSVCKNTALLIATFLPKLKILDISSTNI 794
             V +  A +I   LP+LK L+I S ++
Sbjct: 181 LYVDEEMASVICNSLPRLKKLEIPSCDM 208


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 16/208 (7%)
 Frame = +3

Query: 219 SRAWKDLDKDVLITIYQKLGINDLIVG-APLCCTSWYNVSKDPSVWKNVNCRG-VFDTHK 392
           SR+W +L  D+L++I  ++G  DL+ G A   C+SW   ++DP  W+ V+ R  V  T  
Sbjct: 6   SRSWAELQHDLLVSIMTRVGAPDLLWGGASRACSSWRAAARDPLAWRRVDLRDWVALTSG 65

Query: 393 GKAVEPSQ-------------LIKFVIARSQGCLTSITFPSNASVDDLLLLSERCHRLEH 533
            +A  P               +++     ++G + ++  P  A  D LL L+ERC  L +
Sbjct: 66  RRAARPGHSSSRVSVHAALVGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLHY 125

Query: 534 ICLKISERTVLEGKTAIDKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-C 710
             L  +  T         K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV  
Sbjct: 126 FSLPSTCMTY----DQFCKAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSA 180

Query: 711 NSVCKNTALLIATFLPKLKILDISSTNI 794
             V +  A +I   LP+LK L+I S ++
Sbjct: 181 LYVDEEMASVICNSLPRLKKLEIPSCDM 208


>ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium
           distachyon]
          Length = 297

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
 Frame = +3

Query: 222 RAWKDLDKDVLITIYQKLGINDLIVG-APLCCTSWYNVSKDPSVWKNVNCR--------- 371
           R W +L  D+L++I  ++G  DL+ G AP  C++W+  ++DP  W+ V+ R         
Sbjct: 7   RQWGELQHDLLVSIMSRVGSPDLLSGGAPRACSAWWGAARDPLAWRRVDLRDWTALTSAR 66

Query: 372 ---GVFDTHKGKAVEP--SQLIKFVIARSQGCLTSITFPSNASVDDLLLLSERCHRLEHI 536
              G   T +  +V+   + +++    R+ G + ++  P  A  + LL L+ER   L + 
Sbjct: 67  RAAGTGGTSRRVSVQDDLAGVLEIAARRADGRMEAVLLPEFADEEHLLFLAERSLNLHY- 125

Query: 537 CLKISERTVLEGKTAIDKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CN 713
               S  T         K IG LQ L  M VDE  I+ D  L  V +CCPNF++LKV   
Sbjct: 126 ---FSFPTTCMTYDQFCKVIGKLQYLRGMAVDESLINYD-VLLHVYQCCPNFLELKVFAV 181

Query: 714 SVCKNTALLIATFLPKLKILDISSTNI 794
            V ++ A +I   LP+LK L+I ++++
Sbjct: 182 YVDEDMASIICDCLPRLKKLEIPNSDM 208


>ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group]
           gi|108709324|gb|ABF97119.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548961|dbj|BAF12404.1| Os03g0562200 [Oryza sativa
           Japonica Group] gi|215686513|dbj|BAG87774.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706384|dbj|BAG93240.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193151|gb|EEC75578.1| hypothetical protein
           OsI_12264 [Oryza sativa Indica Group]
          Length = 305

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
 Frame = +3

Query: 222 RAWKDLDKDVLITIYQKLGINDLIV-GAPLCCTSWYNVSKDPSVWKNVNCR--GVFDTHK 392
           R W DL  D+L+ I  ++G+ DL+  GA   C++W   ++DP VW+ V+ R   V  + +
Sbjct: 9   RPWADLQHDLLVMIMSRVGLPDLLSGGATRACSAWRASARDPLVWRRVDLRDWAVLTSAR 68

Query: 393 -------------GKAVEPSQ-----LIKFVIARSQGCLTSITFPSNASVDDLLLLSERC 518
                        G+   P Q     +++ V+ R+ G + ++  P  A  + LL L++R 
Sbjct: 69  RRLAAGDGEAAAAGRGRVPLQAALCSVLEIVVRRAAGRMEALLLPEFADEEHLLFLAQRN 128

Query: 519 HRLEHICLKISERTVLEGKTAIDKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIK 698
             L +  L  +  T  + + AIDK    LQ L+ M VDE  I+ D  L  V +CCP+F++
Sbjct: 129 PNLHYFSLPATCITYDQFRKAIDK----LQFLKGMAVDEGLINHD-VLSHVHQCCPDFLE 183

Query: 699 LKV-CNSVCKNTALLIATFLPKLKILDISSTNI 794
           LKV    V +  A +I   LP+LK L+I ++++
Sbjct: 184 LKVFALYVDEEMASIICNSLPRLKKLEIPNSDM 216