BLASTX nr result

ID: Coptis21_contig00019768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019768
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518517.1| PREDICTED: probable galacturonosyltransferas...    76   3e-12
ref|XP_003545139.1| PREDICTED: probable galacturonosyltransferas...    75   6e-12
ref|XP_003551912.1| PREDICTED: probable galacturonosyltransferas...    74   1e-11
ref|XP_003532100.1| PREDICTED: probable galacturonosyltransferas...    73   2e-11
ref|XP_002279893.1| PREDICTED: probable galacturonosyltransferas...    67   1e-09

>ref|XP_003518517.1| PREDICTED: probable galacturonosyltransferase 15-like [Glycine max]
          Length = 522

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/56 (58%), Positives = 46/56 (82%)
 Frame = -1

Query: 168 DLNEDNERRIKTLRPRSLSLMDQLWIFLPELFPELNRIILLHDDTLVQHDLSPLWE 1
           D +ED+ R ++ LRP SLSL++ L I++PELFP+LN+++LL DD +VQHDLS LWE
Sbjct: 294 DHSEDHNRYLEALRPSSLSLLNHLRIYIPELFPDLNKVVLLDDDVVVQHDLSSLWE 349


>ref|XP_003545139.1| PREDICTED: probable galacturonosyltransferase 15-like [Glycine max]
          Length = 524

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/66 (53%), Positives = 51/66 (77%)
 Frame = -1

Query: 198 YNIFKEWGGDDLNEDNERRIKTLRPRSLSLMDQLWIFLPELFPELNRIILLHDDTLVQHD 19
           YN +KE   D  +E+++R  + LRP SLSL++ L I++PELFP+LN+++LL DD +VQHD
Sbjct: 287 YNNYKEKELDH-SEEHDRYFEALRPSSLSLLNHLRIYIPELFPDLNKVVLLDDDVVVQHD 345

Query: 18  LSPLWE 1
           +S LWE
Sbjct: 346 ISSLWE 351


>ref|XP_003551912.1| PREDICTED: probable galacturonosyltransferase 15-like [Glycine max]
          Length = 525

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = -1

Query: 168 DLNEDNERRIKTLRPRSLSLMDQLWIFLPELFPELNRIILLHDDTLVQHDLSPLWE 1
           D  ++N R ++ LRP SLSLM+QL I+LPELFP+L +I+ L DD +VQHD+S LWE
Sbjct: 299 DYTQENSRYLEALRPSSLSLMNQLRIYLPELFPDLKKIVFLDDDVVVQHDISFLWE 354


>ref|XP_003532100.1| PREDICTED: probable galacturonosyltransferase 15-like [Glycine max]
          Length = 525

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/56 (57%), Positives = 44/56 (78%)
 Frame = -1

Query: 168 DLNEDNERRIKTLRPRSLSLMDQLWIFLPELFPELNRIILLHDDTLVQHDLSPLWE 1
           D  +++ R ++ LRP SLSLM+QL I+LPELFP+L +I+ L DD +VQHD+S LWE
Sbjct: 299 DYTQEHSRYLEALRPSSLSLMNQLRIYLPELFPDLKKIVFLDDDVVVQHDISSLWE 354


>ref|XP_002279893.1| PREDICTED: probable galacturonosyltransferase 15 [Vitis vinifera]
           gi|296086324|emb|CBI31765.3| unnamed protein product
           [Vitis vinifera]
          Length = 528

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/66 (48%), Positives = 47/66 (71%)
 Frame = -1

Query: 198 YNIFKEWGGDDLNEDNERRIKTLRPRSLSLMDQLWIFLPELFPELNRIILLHDDTLVQHD 19
           YN  KE    + +  ++R+++ L P  LSLM+ L I++PELFP+L++I+ L DD +VQHD
Sbjct: 295 YNNLKE-DNFEFDGQHKRKLEALSPSCLSLMNHLRIYIPELFPDLDKIVFLDDDIVVQHD 353

Query: 18  LSPLWE 1
           LS LWE
Sbjct: 354 LSSLWE 359


Top