BLASTX nr result

ID: Coptis21_contig00019766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019766
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-21
ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...    69   1e-19
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...    76   9e-18
ref|XP_002511226.1| conserved hypothetical protein [Ricinus comm...    74   7e-17
ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812...    62   4e-13

>ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|222859378|gb|EEE96925.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 78.6 bits (192), Expect(2) = 4e-21
 Identities = 39/62 (62%), Positives = 43/62 (69%)
 Frame = -3

Query: 192 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMVNQDRLEGEARPEIVWLVMKERVPDN 13
           D+EKKI++EKDTCPGFISDG  RV W NEAY KMV Q   EG      VWL MKE+VP  
Sbjct: 201 DDEKKINMEKDTCPGFISDGYGRVTWENEAYRKMVGQG--EGGDHQVFVWLAMKEKVPMK 258

Query: 12  YT 7
            T
Sbjct: 259 VT 260



 Score = 47.8 bits (112), Expect(2) = 4e-21
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -1

Query: 377 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 246
           VS++  V+ PR V  VGSCV VEC+TDT  + + LG TD+EKKI+
Sbjct: 163 VSADQTVVMPRVVNIVGSCVTVECVTDTWVDLDGLGRTDDEKKIN 207


>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score = 68.9 bits (167), Expect(2) = 1e-19
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -3

Query: 192 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMVNQDRLEGEARP---EIVWLVMKERV 22
           DEEK  +L++DTCPGF+SDG NRV WTN AY +MV      G   P    +VWLVMK RV
Sbjct: 184 DEEKINNLDRDTCPGFVSDGLNRVTWTNAAYRRMV------GHVTPGPEMMVWLVMKARV 237

Query: 21  PDNYTA 4
           P  + A
Sbjct: 238 PVTFPA 243



 Score = 52.8 bits (125), Expect(2) = 1e-19
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -1

Query: 383 RAVSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEK 255
           RAV ++  V+ P+PVR VGSCV VEC+TDT  + + LGSTDEEK
Sbjct: 144 RAVITDRTVVMPQPVRLVGSCVTVECVTDTWVDGDWLGSTDEEK 187


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 76.3 bits (186), Expect(2) = 9e-18
 Identities = 36/58 (62%), Positives = 42/58 (72%)
 Frame = -3

Query: 192 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMVNQDRLEGEARPEIVWLVMKERVP 19
           D+EK+++LEKDTCPGFISDG  RV WTNEAY KMV Q   EG      VWL +KE+ P
Sbjct: 207 DKEKRVNLEKDTCPGFISDGYGRVTWTNEAYRKMVGQG--EGGDHQVFVWLAIKEKAP 262



 Score = 38.9 bits (89), Expect(2) = 9e-18
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -1

Query: 377 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 246
           V ++  V+ P  +  VGSCV +EC+TDT  + + LG TD+EK+++
Sbjct: 169 VPADRTVVMPGVMNIVGSCVTLECVTDTWVDVDGLGRTDKEKRVN 213


>ref|XP_002511226.1| conserved hypothetical protein [Ricinus communis]
           gi|223550341|gb|EEF51828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 74.3 bits (181), Expect(2) = 7e-17
 Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -3

Query: 192 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMVNQ--DRLEGEARPEIVWLVMKERV 22
           DEEK+++LE+DTCPGFISDG  RV WTNEAY KM  Q  D   GE    +VWLVMK++V
Sbjct: 185 DEEKRMNLERDTCPGFISDGFGRVTWTNEAYKKMAGQGEDWRRGEV---VVWLVMKDKV 240



 Score = 37.7 bits (86), Expect(2) = 7e-17
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -1

Query: 398 TPIWQRAVSSNLRVLTPRPVRPV-GSCVIVECLTDTCTE-EMLGSTDEEKKIH 246
           T ++  +V     V  P+ +R V GSCV VEC+TDT    + LG TDEEK+++
Sbjct: 139 TMLFGMSVDHQNVVTHPQIMRVVMGSCVTVECITDTWVNLDGLGGTDEEKRMN 191


>ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812834 [Glycine max]
          Length = 290

 Score = 61.6 bits (148), Expect(2) = 4e-13
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -3

Query: 192 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMVNQDRLEGEARPEIVWLVMK 31
           DEE++++L  DTCPGFISDG  RV WTNEAYGKM+   + EG+     V LV K
Sbjct: 180 DEERRLNLSNDTCPGFISDGYGRVTWTNEAYGKMMMM-KGEGDEGQGPVLLVNK 232



 Score = 37.7 bits (86), Expect(2) = 4e-13
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = -1

Query: 326 SCVIVECLTDTCTE-EMLGSTDEEKKIH 246
           SCV VE +TDTC E E LGSTDEE++++
Sbjct: 159 SCVTVEGVTDTCLESEWLGSTDEERRLN 186


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