BLASTX nr result

ID: Coptis21_contig00019761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019761
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    75   9e-12
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    72   6e-11
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    67   3e-09
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    62   6e-08

>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 44/161 (27%), Positives = 80/161 (49%)
 Frame = -2

Query: 615 LNTDGSFQQGKAGYGGALRDRNGEVLMAFSGNSTRHSVLHQXXXXXXXXXXXVAKMNIKE 436
           LNTDGS  +G AG+GG  RD NG+ + A++  + ++ +               + + IK 
Sbjct: 165 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 224

Query: 435 VVMQADSLRVIQILEKREAPPWYCKNLVAQIECEQVKFKEVQFQHVFREGNQAADYLSRI 256
           + +++DS+ V++ + +++       + +  I     KF++ +  H +RE N+AAD+LSR+
Sbjct: 225 IWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSRM 284

Query: 255 SSHCSAHNTECCNQCMYFIPPMDQKLSELIKGDEEGKMYLR 133
               S          +         L+ +IK D EG+MY R
Sbjct: 285 DLSGS--------DVVLGTADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/161 (26%), Positives = 78/161 (48%)
 Frame = -2

Query: 615 LNTDGSFQQGKAGYGGALRDRNGEVLMAFSGNSTRHSVLHQXXXXXXXXXXXVAKMNIKE 436
           LNTDGS  +G AG+GG  RD NG+ + A++  + ++ +               + + IK 
Sbjct: 278 LNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKA 337

Query: 435 VVMQADSLRVIQILEKREAPPWYCKNLVAQIECEQVKFKEVQFQHVFREGNQAADYLSRI 256
           + +++DS+  ++ + +++       + +  I     KF++    H +RE N+AAD+LS++
Sbjct: 338 IWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKM 397

Query: 255 SSHCSAHNTECCNQCMYFIPPMDQKLSELIKGDEEGKMYLR 133
                       N  +         L+ +IK D EG+MY R
Sbjct: 398 DL--------SGNDVVLGTADFPNGLNSIIKDDAEGRMYRR 430


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/161 (26%), Positives = 72/161 (44%)
 Frame = -2

Query: 615 LNTDGSFQQGKAGYGGALRDRNGEVLMAFSGNSTRHSVLHQXXXXXXXXXXXVAKMNIKE 436
           LNTDGS  +  AG+GG LRD  G  + AF   +    +                 + IK 
Sbjct: 284 LNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKV 343

Query: 435 VVMQADSLRVIQILEKREAPPWYCKNLVAQIECEQVKFKEVQFQHVFREGNQAADYLSRI 256
           + +++DS+  ++ + + ++        +  I     KF+E +  H +RE N+AADYLS++
Sbjct: 344 IWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKM 403

Query: 255 SSHCSAHNTECCNQCMYFIPPMDQKLSELIKGDEEGKMYLR 133
                       N  + +       L  +IK D +G++Y R
Sbjct: 404 VLE--------RNDVVLWPVHFPTTLQNIIKDDAQGRIYCR 436


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/161 (26%), Positives = 71/161 (44%)
 Frame = -2

Query: 615 LNTDGSFQQGKAGYGGALRDRNGEVLMAFSGNSTRHSVLHQXXXXXXXXXXXVAKMNIKE 436
           LNTDGS     AG GG  RD  G  +  F   ++ H +                 ++I+ 
Sbjct: 177 LNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQV 236

Query: 435 VVMQADSLRVIQILEKREAPPWYCKNLVAQIECEQVKFKEVQFQHVFREGNQAADYLSRI 256
           + +++DSL V+  + +++         + QI     KFK+ +  H +RE N+AADYL+++
Sbjct: 237 LWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLAKM 296

Query: 255 SSHCSAHNTECCNQCMYFIPPMDQKLSELIKGDEEGKMYLR 133
                          + +       L+ +IK D EG +Y R
Sbjct: 297 VVE---------RDVVLWPADFPTSLNNIIKDDAEGMVYCR 328


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = -2

Query: 615 LNTDGSFQ--QGKAGYGGALRDRNGEVLMAFSGNSTRHSVLHQXXXXXXXXXXXVAKMNI 442
           LN DGSF+   G+AG GG LRD  G  + AF+      + L               K+N+
Sbjct: 237 LNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALEGGLRLALKLNV 296

Query: 441 KEVVMQADSLRVIQILE-KREAPPWYCKNLVAQIECEQVKFKEVQFQHVFREGNQAADYL 265
           + ++++ DS   I++L  KRE      K+L+  I      F+EV  +H FRE N+ AD+L
Sbjct: 297 ERILIEGDSKITIEMLSGKREXTXEEEKSLMTHIRELLQGFQEVTARHEFREANRPADHL 356

Query: 264 SRISS 250
           + I++
Sbjct: 357 ANIAT 361


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