BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019759
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   209   1e-52
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   207   7e-52
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              206   2e-51
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   204   5e-51
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   200   9e-50

>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  209 bits (533), Expect = 1e-52
 Identities = 101/165 (61%), Positives = 126/165 (76%), Gaps = 2/165 (1%)
 Frame = +1

Query: 1   DKFTNTTLEIKFGTHELSAPQKGN--AAIGQRLLPFECRQGKGSYSGKFTVQVCFSYNGR 174
           D FTN  L I  G  EL  PQK      I + LLP+ECRQ K SY+GKF   VCF Y+ +
Sbjct: 47  DSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK 106

Query: 175 VPLKEKFNFGQLPIMLKSKLCHLRGANAERLVAYREEPTEMGGYFIVNGLERLIRFLIMP 354
             ++EKFNFGQ PIMLKSKLCHLRG + ++LV+Y EE +EMGGYF++NGLER++R LI P
Sbjct: 107 AVIREKFNFGQFPIMLKSKLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAP 166

Query: 355 KRNYPMNVERDSFRERQDGYTNKAVIIRCVRNDQSSVTNKLYYLQ 489
           KRNYP ++ R+SF +R++GYT+KAV+IRCVR DQSSVT KLYYL+
Sbjct: 167 KRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLR 211


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/165 (60%), Positives = 125/165 (75%), Gaps = 2/165 (1%)
 Frame = +1

Query: 1   DKFTNTTLEIKFGTHELSAPQKGN--AAIGQRLLPFECRQGKGSYSGKFTVQVCFSYNGR 174
           D FTN  L I  G  EL  PQK      I + LLP+ECRQ K SY+GKF   VCF Y+ +
Sbjct: 47  DSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK 106

Query: 175 VPLKEKFNFGQLPIMLKSKLCHLRGANAERLVAYREEPTEMGGYFIVNGLERLIRFLIMP 354
             ++EK NFGQ PIMLKSKLCHLRG + ++LV+Y EE +EMGGYF++NGLER++R LI P
Sbjct: 107 AVIREKLNFGQFPIMLKSKLCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAP 166

Query: 355 KRNYPMNVERDSFRERQDGYTNKAVIIRCVRNDQSSVTNKLYYLQ 489
           KRNYP ++ R+SF +R++GYT+KAV+IRCVR DQSSVT KLYYL+
Sbjct: 167 KRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLR 211


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/163 (61%), Positives = 126/163 (77%), Gaps = 2/163 (1%)
 Frame = +1

Query: 7   FTNTTLEIKFGTHELSAPQKGNAAIGQR--LLPFECRQGKGSYSGKFTVQVCFSYNGRVP 180
           F  T + + FG  EL  PQK  +A   R  L PFECRQ K SYSGK    VCF Y   V 
Sbjct: 12  FFLTRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVA 71

Query: 181 LKEKFNFGQLPIMLKSKLCHLRGANAERLVAYREEPTEMGGYFIVNGLERLIRFLIMPKR 360
           ++EKFN GQ PIMLKSKLCHLRGA+ ++LV+ +EE +EMGGYFI+NGLER++R LI+PKR
Sbjct: 72  IREKFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKR 131

Query: 361 NYPMNVERDSFRERQDGYTNKAVIIRCVRNDQSSVTNKLYYLQ 489
           NYPM++ R+SFR+R++GYT+KAV+IRCVR DQS+VT KLYYL+
Sbjct: 132 NYPMSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLR 174


>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/163 (61%), Positives = 126/163 (77%), Gaps = 2/163 (1%)
 Frame = +1

Query: 7   FTNTTLEIKFGTHELSAPQKGNAAIGQR--LLPFECRQGKGSYSGKFTVQVCFSYNGRVP 180
           F  T + + FG  EL  PQK  +A   R  L PFECRQ K SYSGK    VCF Y   V 
Sbjct: 51  FFLTRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVV 110

Query: 181 LKEKFNFGQLPIMLKSKLCHLRGANAERLVAYREEPTEMGGYFIVNGLERLIRFLIMPKR 360
           ++EKFN GQ P+MLKSKLCHLRGA+ ++LV+ +EE +EMGGYFI+NGLER++R LI+PKR
Sbjct: 111 IREKFNLGQFPMMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKR 170

Query: 361 NYPMNVERDSFRERQDGYTNKAVIIRCVRNDQSSVTNKLYYLQ 489
           NYPM++ R+SFR+R++GYT+KAV+IRCVR DQS+VT KLYYL+
Sbjct: 171 NYPMSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLR 213


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
           max]
          Length = 1175

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/165 (59%), Positives = 127/165 (76%), Gaps = 2/165 (1%)
 Frame = +1

Query: 1   DKFTNTTLEIKFGTHELSAPQKGNAAIGQR--LLPFECRQGKGSYSGKFTVQVCFSYNGR 174
           D FT+T L I      L  PQK   +   R  LLPFECRQ K SYSGK T+ VCF YN  
Sbjct: 47  DDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDG 106

Query: 175 VPLKEKFNFGQLPIMLKSKLCHLRGANAERLVAYREEPTEMGGYFIVNGLERLIRFLIMP 354
             ++E  NFGQ PIML+SKLC+LRGA+ ++LV+Y+EE +EMGGYFI+NGLER++R LI+P
Sbjct: 107 PIIRENVNFGQFPIMLQSKLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILP 166

Query: 355 KRNYPMNVERDSFRERQDGYTNKAVIIRCVRNDQSSVTNKLYYLQ 489
           KRNYPM++ R+SF +R++GYT+KAV+IRCVR DQSS++ +LYYL+
Sbjct: 167 KRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLR 211