BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019750
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98003.1| retrotransposon protein, putative, unclassified [...    89   7e-16
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   2e-15
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi...    84   3e-14
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              80   4e-13
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    80   4e-13

>gb|ABA98003.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 583

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 60/187 (32%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
 Frame = +2

Query: 80  KDKMVWAGETSGKFTVKSVYKFLTQEEKKGQSSKFSSSTIKQLWKAKLPANVTMFLWKVY 259
           +D +VW   T+G++  KS Y+F         S+K S       W+A  PA   +F W V 
Sbjct: 391 QDSIVWQWTTNGEYGAKSAYQFQFNGMVLSPSTKLS-------WEAWAPAKCKIFSWLVL 443

Query: 260 MNALPMGDRLASTKMNGDFSCPLCFSTLETVDHLFFDCEWSRTLWFASELGLRMNHKGEN 439
            N +   DRL       ++ C LCF  LET+DHL F+C  S+ +WF     L   H    
Sbjct: 444 QNRVWTTDRLQIRGWPNNYFCQLCFRNLETIDHLLFECPVSKQIWFGILTWLHQGHIIPK 503

Query: 440 W-----AKDWITKFISWSHSKDRHLAQAGVHACYIL--HNIWTTRNAFKFEHKTPSRDKT 598
           W       DW T+      S      Q G+ A ++L    IW  RNA  F  K  +  + 
Sbjct: 504 WNTSRNLLDWWTQ----GTSDPEATKQKGLRALFLLIAWEIWKERNARIFRAKEATVHQM 559

Query: 599 IRRSQVE 619
           I R Q E
Sbjct: 560 ISRIQEE 566


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
 Frame = +2

Query: 50   AIQVRPVTQAK--DKMVWAGETSGKFTVKSVYKFLTQEEKKGQSSKFSSSTIK---QLWK 214
            AIQ  PV   K  D+ +W    +G+FTV+S Y     E++K   S      +K   ++WK
Sbjct: 997  AIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWK 1056

Query: 215  AKLPANVTMFLWKVYMNALPMGDRLASTKMNGDFSCPLCFSTLETVDHLFFDCEWSRTLW 394
            AK+P  V +F WK   N L +   +    MN D +CP C    ET +HL + C+ S   W
Sbjct: 1057 AKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAW 1116

Query: 395  FASELGLRMNHKGENWAKDWITKFISWSHSKDRHLAQAGVHACYILHNIWTTRNAFKFEH 574
            + S L +   +      + W+   +  +H      A   +    I  NIW  RN + FE 
Sbjct: 1117 YISPLRIHTGNIEAGSFRIWVESLLD-THKDTEWWALFWM----ICWNIWLGRNKWVFEK 1171

Query: 575  KTPSRDKTIRRS 610
            K  +  + + R+
Sbjct: 1172 KKLAFQEVVERA 1183


>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
            gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
            sativa Japonica Group]
          Length = 1026

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 60/177 (33%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
 Frame = +2

Query: 68   VTQAKDKMVWAGETSGKFTVKSVYKFLTQEEKKGQSSKFSSSTIKQLWKAKLPANVTMFL 247
            V   KDK+ W     GKFTV+S Y+ L     K Q + F +   K++WK ++P  + +F+
Sbjct: 806  VENCKDKLWWTLSKDGKFTVRSFYRAL-----KLQQTSFPN---KKIWKFRVPLKIRIFI 857

Query: 248  WKVYMNALPMGDRLASTKMN-GDFSCPLCFSTLETVDHLFFDCEWSRTLWFASELGLRMN 424
            W    N +   D L       GD  C  C   +ETV HLFFDC  +R +W  + +   +N
Sbjct: 858  WFFTKNKILTKDNLLKRGWRKGDNKCQFC-DKVETVQHLFFDCPLARLIW--NIIACALN 914

Query: 425  HKGENWAKDWITKFISWSHSKD---RHLAQAGVHACYILHNIWTTRNAFKFEHKTPS 586
             K     +D    F SW  S D   ++L   G+ A  +L +IW  RN   FE K P+
Sbjct: 915  VKPVLSRQD---LFGSWIQSMDKFTKNLVIVGIAA--VLWSIWKCRNKACFERKLPN 966


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/207 (23%), Positives = 89/207 (42%)
 Frame = +2

Query: 8    LVDFFPPLLVESIKAIQVRPVTQAKDKMVWAGETSGKFTVKSVYKFLTQEEKKGQSSKFS 187
            L +  P  +++ ++A  +   ++ +D + W   T+G  TV S Y  +   +   +S  + 
Sbjct: 981  LHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDW- 1039

Query: 188  SSTIKQLWKAKLPANVTMFLWKVYMNALPMGDRLASTKMNGDFSCPLCFSTLETVDHLFF 367
                  +W+A     + +F+WK+  N L +        +    SCP+C    ET+DHLF 
Sbjct: 1040 ------IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFR 1093

Query: 368  DCEWSRTLWFASELGLRMNHKGENWAKDWITKFISWSHSKDRHLAQAGVHACYILHNIWT 547
             C  +   W ++   L            W+    S S  KD +     +   YIL N+W 
Sbjct: 1094 RCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACS-SQQKDGYSTNWSLIFPYILWNLWK 1152

Query: 548  TRNAFKFEHKTPSRDKTIRRSQVEATK 628
             RN   F++   +    + RS +E+++
Sbjct: 1153 ARNRLVFDNNITAPSDILNRSFMESSE 1179


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
 Frame = +2

Query: 8    LVDFFPPLLVESIKAIQVRPVTQAKDKMVWAGETSGKFTVKSVYKFLTQE--EKKGQSSK 181
            L D FP   VE I  ++ RP+   +D   W    +G ++VK+ Y+FL+++   +  Q +K
Sbjct: 976  LRDLFPWKDVEII--LKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAK 1033

Query: 182  FS---SSTIKQLWKAKLPANVTMFLWKVYMNALPMGDRLASTKMNGDFSCPLCFSTLETV 352
                 +S   ++W       + +FLWK    A+P+ DRL +  +  D  C +C +  ET+
Sbjct: 1034 VKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETI 1093

Query: 353  DHLFFDCEWSRTLWFASELGLRMNHKGENWAKDWITKFISWSHSKD--RHLAQAGVHACY 526
            +H+ F+C  +R +W  + L      +  N     +++ I  +   D   HL      + +
Sbjct: 1094 NHILFECPLARQVWAITHLS-SAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFV---SPW 1149

Query: 527  ILHNIWTTRNAFKFEHK 577
            IL  +W  RNA  FE K
Sbjct: 1150 ILWFLWKNRNALLFEGK 1166