BLASTX nr result

ID: Coptis21_contig00019730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019730
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513311.1| splicing endonuclease positive effector sen1...   197   6e-49
emb|CBI18449.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   182   2e-44
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...   181   5e-44
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...   181   5e-44

>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
           communis] gi|223547219|gb|EEF48714.1| splicing
           endonuclease positive effector sen1, putative [Ricinus
           communis]
          Length = 2110

 Score =  197 bits (502), Expect = 6e-49
 Identities = 90/139 (64%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   LLDRWRGIXXXXXXXXXXS-FKQRQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178
           LLDRWRGI          +  K R++   KE+WF+ TF +LI L ++ H+WC SWDLMGP
Sbjct: 7   LLDRWRGIEEEEERNDDDNPLKLRRLHQRKEQWFAHTFTYLISLPEENHIWCGSWDLMGP 66

Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358
           LLETFYNYFKD+R DSPL++LW+RISQEMRHC QCI Q+HQAQE+Y +EYE S +GPLL+
Sbjct: 67  LLETFYNYFKDDRPDSPLRLLWKRISQEMRHCIQCISQHHQAQELYAMEYEFSSIGPLLD 126

Query: 359 VLRSLDEERVSQHLREINA 415
           VLR+LDEER++QHLREINA
Sbjct: 127 VLRTLDEERLTQHLREINA 145


>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/143 (61%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
 Frame = +2

Query: 2   LLDRWRGIXXXXXXXXXXSF----KQRQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDL 169
           LL RWRGI                K+R+++ LKE+WFSD FNFLI L  + H+WC SW+L
Sbjct: 67  LLVRWRGIEEVIGDGGDDVLPDTPKRRRLQRLKEDWFSDAFNFLIDLPSEDHIWCGSWEL 126

Query: 170 MGPLLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGP 349
           MGPLLETFYNY  DE +DSPLK+LW+R+S EMR CT CI Q+HQAQ+MY++EY+SS + P
Sbjct: 127 MGPLLETFYNYSTDESNDSPLKLLWKRMSVEMRKCTLCISQHHQAQDMYSMEYDSSSISP 186

Query: 350 LLNVLRSLDEERVSQHLREINAK 418
           LL+VLRSLDEERV QHL+EINA+
Sbjct: 187 LLSVLRSLDEERVGQHLKEINAR 209


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
           lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
           ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/140 (62%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178
           LL RWR I               R++   KE+WF+D F  LI L KDTH+WC   D+MGP
Sbjct: 11  LLSRWRRIEEDEEENDDSDPSSVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDVMGP 70

Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358
           LLETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY  EYE S VGPLL+
Sbjct: 71  LLETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLD 130

Query: 359 VLRSLDEERVSQHLREINAK 418
           VLR LDEERV++HL+EIN K
Sbjct: 131 VLRKLDEERVTRHLQEINFK 150


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
           [Arabidopsis thaliana]
          Length = 2142

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/140 (61%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178
           LL+RWR I               R++   KE+WF+D F  LI L KDTH+WC   D+MGP
Sbjct: 11  LLNRWRRIEEDEEENDDSDPSAVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDIMGP 70

Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358
           L+ETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY  EYE S VGPLL 
Sbjct: 71  LIETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLV 130

Query: 359 VLRSLDEERVSQHLREINAK 418
           VLR LDEERV++HL+EIN K
Sbjct: 131 VLRKLDEERVTRHLQEINLK 150


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
           gi|332191377|gb|AEE29498.1| hydrolase domain-containing
           protein [Arabidopsis thaliana]
          Length = 2127

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/140 (61%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178
           LL+RWR I               R++   KE+WF+D F  LI L KDTH+WC   D+MGP
Sbjct: 11  LLNRWRRIEEDEEENDDSDPSAVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDIMGP 70

Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358
           L+ETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY  EYE S VGPLL 
Sbjct: 71  LIETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLV 130

Query: 359 VLRSLDEERVSQHLREINAK 418
           VLR LDEERV++HL+EIN K
Sbjct: 131 VLRKLDEERVTRHLQEINLK 150


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