BLASTX nr result
ID: Coptis21_contig00019730
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019730 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513311.1| splicing endonuclease positive effector sen1... 197 6e-49 emb|CBI18449.3| unnamed protein product [Vitis vinifera] 187 1e-45 ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab... 182 2e-44 gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p... 181 5e-44 ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi... 181 5e-44 >ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus communis] gi|223547219|gb|EEF48714.1| splicing endonuclease positive effector sen1, putative [Ricinus communis] Length = 2110 Score = 197 bits (502), Expect = 6e-49 Identities = 90/139 (64%), Positives = 111/139 (79%), Gaps = 1/139 (0%) Frame = +2 Query: 2 LLDRWRGIXXXXXXXXXXS-FKQRQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178 LLDRWRGI + K R++ KE+WF+ TF +LI L ++ H+WC SWDLMGP Sbjct: 7 LLDRWRGIEEEEERNDDDNPLKLRRLHQRKEQWFAHTFTYLISLPEENHIWCGSWDLMGP 66 Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358 LLETFYNYFKD+R DSPL++LW+RISQEMRHC QCI Q+HQAQE+Y +EYE S +GPLL+ Sbjct: 67 LLETFYNYFKDDRPDSPLRLLWKRISQEMRHCIQCISQHHQAQELYAMEYEFSSIGPLLD 126 Query: 359 VLRSLDEERVSQHLREINA 415 VLR+LDEER++QHLREINA Sbjct: 127 VLRTLDEERLTQHLREINA 145 >emb|CBI18449.3| unnamed protein product [Vitis vinifera] Length = 2154 Score = 187 bits (474), Expect = 1e-45 Identities = 88/143 (61%), Positives = 109/143 (76%), Gaps = 4/143 (2%) Frame = +2 Query: 2 LLDRWRGIXXXXXXXXXXSF----KQRQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDL 169 LL RWRGI K+R+++ LKE+WFSD FNFLI L + H+WC SW+L Sbjct: 67 LLVRWRGIEEVIGDGGDDVLPDTPKRRRLQRLKEDWFSDAFNFLIDLPSEDHIWCGSWEL 126 Query: 170 MGPLLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGP 349 MGPLLETFYNY DE +DSPLK+LW+R+S EMR CT CI Q+HQAQ+MY++EY+SS + P Sbjct: 127 MGPLLETFYNYSTDESNDSPLKLLWKRMSVEMRKCTLCISQHHQAQDMYSMEYDSSSISP 186 Query: 350 LLNVLRSLDEERVSQHLREINAK 418 LL+VLRSLDEERV QHL+EINA+ Sbjct: 187 LLSVLRSLDEERVGQHLKEINAR 209 >ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata] Length = 2129 Score = 182 bits (463), Expect = 2e-44 Identities = 87/140 (62%), Positives = 102/140 (72%), Gaps = 1/140 (0%) Frame = +2 Query: 2 LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178 LL RWR I R++ KE+WF+D F LI L KDTH+WC D+MGP Sbjct: 11 LLSRWRRIEEDEEENDDSDPSSVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDVMGP 70 Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358 LLETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY EYE S VGPLL+ Sbjct: 71 LLETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLD 130 Query: 359 VLRSLDEERVSQHLREINAK 418 VLR LDEERV++HL+EIN K Sbjct: 131 VLRKLDEERVTRHLQEINFK 150 >gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1 [Arabidopsis thaliana] Length = 2142 Score = 181 bits (459), Expect = 5e-44 Identities = 86/140 (61%), Positives = 102/140 (72%), Gaps = 1/140 (0%) Frame = +2 Query: 2 LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178 LL+RWR I R++ KE+WF+D F LI L KDTH+WC D+MGP Sbjct: 11 LLNRWRRIEEDEEENDDSDPSAVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDIMGP 70 Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358 L+ETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY EYE S VGPLL Sbjct: 71 LIETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLV 130 Query: 359 VLRSLDEERVSQHLREINAK 418 VLR LDEERV++HL+EIN K Sbjct: 131 VLRKLDEERVTRHLQEINLK 150 >ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana] gi|332191377|gb|AEE29498.1| hydrolase domain-containing protein [Arabidopsis thaliana] Length = 2127 Score = 181 bits (459), Expect = 5e-44 Identities = 86/140 (61%), Positives = 102/140 (72%), Gaps = 1/140 (0%) Frame = +2 Query: 2 LLDRWRGIXXXXXXXXXXSFKQ-RQIRYLKEEWFSDTFNFLICLQKDTHVWCRSWDLMGP 178 LL+RWR I R++ KE+WF+D F LI L KDTH+WC D+MGP Sbjct: 11 LLNRWRRIEEDEEENDDSDPSAVRRLNQRKEQWFTDAFTLLISLPKDTHIWCGHGDIMGP 70 Query: 179 LLETFYNYFKDERDDSPLKILWRRISQEMRHCTQCICQYHQAQEMYNVEYESSCVGPLLN 358 L+ETFYNYFKD+R DSPLK+LW+RIS+EMR C QCICQ+HQ QEMY EYE S VGPLL Sbjct: 71 LIETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEYECSSVGPLLV 130 Query: 359 VLRSLDEERVSQHLREINAK 418 VLR LDEERV++HL+EIN K Sbjct: 131 VLRKLDEERVTRHLQEINLK 150