BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019709
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|NP_176529.1| pentatricopeptide repeat-containing protein [Ar...   100   1e-19
ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|NP_001185295.1| pentatricopeptide repeat-containing protein ...    99   3e-19
gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]              99   4e-19

>ref|XP_002319048.1| predicted protein [Populus trichocarpa] gi|222857424|gb|EEE94971.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  101 bits (252), Expect = 5e-20
 Identities = 43/95 (45%), Positives = 67/95 (70%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A+QL+  ME++  KPN+ +YS IID LCK+  + +A+    EM ++G+ PN +T+S ++H
Sbjct: 101 AIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILH 160

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           G CN+ +   A SLF+ M +R++ PD VTFNIL+D
Sbjct: 161 GFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVD 195



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/94 (32%), Positives = 56/94 (59%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L+  M    L P++  YS+++D LCK+  + +A  L + M +  + PN   ++ LI 
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           G+CN  +L+ A  LF ++  + I PD+VT+ ++I
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMI 404



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/97 (30%), Positives = 57/97 (58%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A++ +S M    + PN+  YS I+   C   R  +A +LF++M ++ V+P+ +TF+ L+ 
Sbjct: 136 AMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVD 195

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           GL     +  A  +FE M ++ + P++ T+N L+D +
Sbjct: 196 GLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/99 (32%), Positives = 57/99 (57%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A +L+ +M++ K++PNI IY+++I  +C   ++  A  LF  +  KG+ P+ +T++ +
Sbjct: 344 DEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVM 403

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I GL        A  LF DM+     P+  T+N++I  F
Sbjct: 404 ISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGF 442



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/97 (32%), Positives = 55/97 (56%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A++L   M K   +P++  YS II+ LCK      A+ L ++M +KG  PN + +S +I 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
            LC  + +  A+    +M  R ISP++VT++ ++  F
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/96 (33%), Positives = 57/96 (59%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A  ++ +M K  L+PN   +S +++ L  + ++ DAV LF EM   G  P+ IT+S +I+
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDA 8
           GLC +     AI L + M ++   P++V ++ +ID+
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/97 (30%), Positives = 57/97 (58%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A +L + M ++   P++  Y+++I   CK  R+ +A  L  EM+ K + P+ +T+S L
Sbjct: 239 DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           + G C   + + A  L E+M    + PD++T++I++D
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/97 (31%), Positives = 56/97 (57%)
 Frame = -3

Query: 304 SDTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSF 125
           S+ A  L   M +  + P+   +++++D L KE  + +A  +F+ M +KGV PN  T++ 
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 124 LIHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           L+ G C+  Q+  A  LF  M ++  +P + ++NILI
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/96 (33%), Positives = 52/96 (54%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A  L++ M  + L P+   YS ++   C++ R  DA  L +EM   G++P+ +T+S +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           + GLC    L  A  L + M +  I P+I  + ILI
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/94 (28%), Positives = 57/94 (60%)
 Frame = -3

Query: 286 LMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIHGLC 107
           +  +M ++ ++PN++ Y+ ++D  C ++++ +A  LF  M  KG  P+  +++ LI G C
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268

Query: 106 NIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
              ++  A  L  +MS ++++PD VT++ L+  F
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/90 (28%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = -3

Query: 274 MEKEKLKPNIHIYSMIIDCLCKENR--VYDAVNLFQEMADKGVVPNAITFSFLIHGLCNI 101
           M+   ++P+++  +++I+C C  N    + A ++   M   G+ PN +TFS L++GL + 
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 100 RQLKGAISLFEDMSKRSISPDIVTFNILID 11
            ++  A+ LF++M K    PD++T++ +I+
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90


>ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g63400 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22
           [Arabidopsis thaliana] gi|332195974|gb|AEE34095.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 577

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/99 (51%), Positives = 65/99 (65%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A  L++ ME  K++ N+ IYS +ID LCK     DA+NLF EM +KGV PN IT+S L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I  LCN  +   A  L  DM +R I+P++VTFN LIDAF
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/99 (40%), Positives = 59/99 (59%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D AL L + ME + ++PN+  YS +I CLC   R  DA  L  +M ++ + PN +TF+ L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I       +L  A  L+++M KRSI PDI T++ LI+ F
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/97 (35%), Positives = 58/97 (59%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L+S M + K+ PN+  ++ +ID   KE ++ +A  L+ EM  + + P+  T+S LI+
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C   +L  A  +FE M  +   P++VT+N LI+ F
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A  +   M  +   PN+  Y+ +I+  CK  R+ + V LF+EM+ +G+V N +T++ L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           IHG    R    A  +F+ M    + P+I+T+N L+D
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/97 (32%), Positives = 56/97 (57%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L   M K  + P+I  YS +I+  C  +R+ +A ++F+ M  K   PN +T++ LI+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C  +++   + LF +MS+R +  + VT+  LI  F
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 56/96 (58%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D  + L   M++  +  N++ Y+++I+C C+ +++  A+ L  +M   G  P+ +T S L
Sbjct: 102 DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           ++G C+ +++  A++L + M +    PD +TF  LI
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           AL L+  M K   +P+I   S +++  C   R+ DAV L  +M + G  P+ ITF+ LIH
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           GL    +   A++L + M +R   P++VT+ ++++
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/99 (26%), Positives = 53/99 (53%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A  +   M  + + PNI  Y+ ++D LCK  ++  A+ +F+ +    + P   T++ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I G+C   +++    LF  +S + + PD++ +N +I  F
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/88 (29%), Positives = 51/88 (57%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           + A+ +   +++ K++P I+ Y+++I+ +CK  +V D  +LF  ++ KGV P+ I ++ +
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPD 38
           I G C     + A +LF  M +    PD
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPD 574


>ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/95 (46%), Positives = 66/95 (69%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           ALQL+  ME++  KP++  Y+ +ID LCK+ R  +A+  F EM D+G+ PN +T+S ++H
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           G CN+ QL  A SLF+ M  R++ P+ VTF IL+D
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVD 289



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = -3

Query: 298 TALQLMSSMEKEKLKPNIHIYSMIIDCLCKENR--VYDAVNLFQEMADKGVVPNAITFSF 125
           T + L   M+   ++PN++  +++I+CLC  NR  V+ A +   +M   G+ P  +TF  
Sbjct: 87  TVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGT 146

Query: 124 LIHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           L++GLC+  ++  A+ LF+++ K   +P ++T+  +I
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTII 183



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/96 (32%), Positives = 53/96 (55%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A   +  M K  L+P    +  +++ LC + ++ DAV LF E+   G  P+ IT++ +I 
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDA 8
           GLC I     A+ L + M ++   PD+V +N +ID+
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/97 (31%), Positives = 57/97 (58%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A +L   M  +   P++ +Y+++I+  CK  R+ +A  L  EM D+ + P+ +T+S L
Sbjct: 333 DEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL 392

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           + G C   + + A  LF++M    + PD +T++IL+D
Sbjct: 393 MQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLD 429



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/95 (33%), Positives = 53/95 (55%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A  L   M    + PN   +++++D LCKE  + +A  +F+ M + GV P+A T+S L+ 
Sbjct: 265 ATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMD 324

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           G C   Q+  A  LF+ M  +  +P +  +NILI+
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/97 (30%), Positives = 56/97 (57%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A ++   M +  ++P+ + YS ++D  C ++++ +A  LF  M  KG  P+   ++ LI+
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C  R+L  A +L  +M  R ++PD VT++ L+  F
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGF 396



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/94 (37%), Positives = 50/94 (53%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A  L+S M    L P+   YS ++   C+  R   A  LF+EM   G++P++IT+S L+ 
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLD 429

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           GLC    L  A  L + M +  I P I  +NILI
Sbjct: 430 GLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/94 (30%), Positives = 52/94 (55%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L   M    L P+   YS+++D LCK   + +A  L + M +  + P+   ++ LI 
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           G+CN  +L+ A  LF ++  + I P +VT+ ++I
Sbjct: 465 GMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/99 (29%), Positives = 54/99 (54%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A +L+ +M++ K++P+I IY+++I  +C   ++  A  LF  +  KG+ P+ +T++ +
Sbjct: 438 DEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVM 497

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I GL        A  +F  M      P+  T+N+ I  F
Sbjct: 498 ISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/97 (29%), Positives = 53/97 (54%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           + A +L S++  + ++P++  Y+++I  L KE    +A  +F++M   G +PN+ T++  
Sbjct: 473 EAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVA 532

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           I G         A+ L E+M  R  S D  TF +L+D
Sbjct: 533 IQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569


>ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
           gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB
           PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana] gi|332195900|gb|AEE34021.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 528

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/100 (51%), Positives = 67/100 (67%)
 Frame = -3

Query: 304 SDTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSF 125
           +D AL L++ ME  K++ N+ IYS +ID LCK     DA+NLF EM +KGV PN IT+S 
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293

Query: 124 LIHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           LI  LCN  +   A  L  DM +R I+P++VTF+ LIDAF
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/95 (35%), Positives = 57/95 (60%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A Q++  M ++   PN+  Y+ +I+  CK  RV   + LF+EM+ +G+V N +T++ LIH
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           G    R    A  +F+ M    + P+I+T+NIL+D
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/97 (35%), Positives = 59/97 (60%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L+S M + K+ PN+  +S +ID   K+ ++  A  L++EM  + + PN  T+S LI+
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C + +L  A  + E M ++   P++VT+N LI+ F
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/97 (32%), Positives = 55/97 (56%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L   M K  + PNI  YS +I+  C  +R+ +A  + + M  K  +PN +T++ LI+
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C  +++   + LF +MS+R +  + VT+  LI  F
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/95 (33%), Positives = 55/95 (57%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           AL L+  M K   +P+I   + +++  C  NR+ DAV L  +M + G  P+ +TF+ LIH
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           GL    +   A++L + M +R   PD+VT+  +++
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/96 (29%), Positives = 53/96 (55%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D  +     ME   +  N++ Y+++I+C C+ +R+  A+ L  +M   G  P+ +T + L
Sbjct: 95  DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL 154

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           ++G C+  ++  A++L + M +    PD VTF  LI
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190


>gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/100 (49%), Positives = 67/100 (67%)
 Frame = -3

Query: 304 SDTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSF 125
           +D A  L++ ME+ KL+P + IY+ IID LCK   + DA+NLF+EM  KG+ PN +T+S 
Sbjct: 32  TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 91

Query: 124 LIHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           LI  LCN  +   A  L  DM +R I+PD+ TF+ LIDAF
Sbjct: 92  LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/97 (36%), Positives = 58/97 (59%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L+S M + K+ P++  +S +ID   KE ++ +A  L+ EM  + + P+ +T+S LI+
Sbjct: 105 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 164

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           G C   +L  A  +FE M  +   PD+VT+N LI  F
Sbjct: 165 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 201



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/94 (32%), Positives = 56/94 (59%)
 Frame = -3

Query: 295 ALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFLIH 116
           A +L   M K  + P+I  YS +I+  C  +R+ +A  +F+ M  K   P+ +T++ LI 
Sbjct: 140 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 199

Query: 115 GLCNIRQLKGAISLFEDMSKRSISPDIVTFNILI 14
           G C  ++++  + +F +MS+R +  + VT+NILI
Sbjct: 200 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/97 (31%), Positives = 55/97 (56%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A Q+   M  +   P++  Y+ +I   CK  RV + + +F+EM+ +G+V N +T++ L
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           I GL        A  +F++M    + P+I+T+N L+D
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 269



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/99 (27%), Positives = 55/99 (55%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           D A ++   M  + + PNI  Y+ ++D LCK  ++  A+ +F+ +    + P   T++ +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDAF 5
           I G+C   +++    LF ++S + + PD+V +N +I  F
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 341



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/98 (28%), Positives = 58/98 (59%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           + A+ +   +++ K++P I+ Y+++I+ +CK  +V D  +LF  ++ KGV P+ + ++ +
Sbjct: 278 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 337

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILIDA 8
           I G C     + A +LF++M +    P+   +N LI A
Sbjct: 338 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/97 (29%), Positives = 54/97 (55%)
 Frame = -3

Query: 301 DTALQLMSSMEKEKLKPNIHIYSMIIDCLCKENRVYDAVNLFQEMADKGVVPNAITFSFL 122
           +  +++   M +  L  N   Y+++I  L +      A  +F+EM   GV PN +T++ L
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267

Query: 121 IHGLCNIRQLKGAISLFEDMSKRSISPDIVTFNILID 11
           + GLC   +L+ A+ +FE + +  + P I T+NI+I+
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304