BLASTX nr result

ID: Coptis21_contig00019694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019694
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282337.2| PREDICTED: probable nitrite transporter At1g...   155   2e-36
emb|CBI27031.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_003614522.1| Peptide transporter PTR [Medicago truncatula...   154   7e-36
dbj|BAJ33669.1| unnamed protein product [Thellungiella halophila]     154   7e-36
ref|NP_177024.1| putative nitrite transporter [Arabidopsis thali...   151   6e-35

>ref|XP_002282337.2| PREDICTED: probable nitrite transporter At1g68570 [Vitis vinifera]
          Length = 672

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/95 (82%), Positives = 84/95 (88%)
 Frame = +2

Query: 23  WRLCTVHRVEELKSIIRMGPIWASGILLSTANVQQGTFSLQQARTMDRHLRGSFQIPPGS 202
           WRL TVHRVEELKS+IRMGPIWASGILL TA  QQGTFSLQQARTMDR L  SFQIPPGS
Sbjct: 398 WRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQARTMDRRLINSFQIPPGS 457

Query: 203 MSVFTTVSMLTTITLYDRVLIRIARRYTGLDRGIT 307
           M+VF+  SML TI LYDR+LIR+ARR+TGLDRGIT
Sbjct: 458 MTVFSMSSMLITIALYDRLLIRVARRFTGLDRGIT 492


>emb|CBI27031.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/95 (82%), Positives = 84/95 (88%)
 Frame = +2

Query: 23  WRLCTVHRVEELKSIIRMGPIWASGILLSTANVQQGTFSLQQARTMDRHLRGSFQIPPGS 202
           WRL TVHRVEELKS+IRMGPIWASGILL TA  QQGTFSLQQARTMDR L  SFQIPPGS
Sbjct: 306 WRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQARTMDRRLINSFQIPPGS 365

Query: 203 MSVFTTVSMLTTITLYDRVLIRIARRYTGLDRGIT 307
           M+VF+  SML TI LYDR+LIR+ARR+TGLDRGIT
Sbjct: 366 MTVFSMSSMLITIALYDRLLIRVARRFTGLDRGIT 400


>ref|XP_003614522.1| Peptide transporter PTR [Medicago truncatula]
           gi|355515857|gb|AES97480.1| Peptide transporter PTR
           [Medicago truncatula]
          Length = 584

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/95 (81%), Positives = 84/95 (88%)
 Frame = +2

Query: 23  WRLCTVHRVEELKSIIRMGPIWASGILLSTANVQQGTFSLQQARTMDRHLRGSFQIPPGS 202
           WRL TVHRVEELKSIIRMGPIWASGILL TA  QQGTFSLQQA+TM+RHL  SF+IP GS
Sbjct: 309 WRLSTVHRVEELKSIIRMGPIWASGILLITAYAQQGTFSLQQAKTMNRHLTKSFEIPAGS 368

Query: 203 MSVFTTVSMLTTITLYDRVLIRIARRYTGLDRGIT 307
           MSVFT ++ML T  LYDRVLIR+ARR+TGLDRGIT
Sbjct: 369 MSVFTILTMLFTTALYDRVLIRVARRFTGLDRGIT 403


>dbj|BAJ33669.1| unnamed protein product [Thellungiella halophila]
          Length = 598

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/96 (78%), Positives = 85/96 (88%)
 Frame = +2

Query: 20  PWRLCTVHRVEELKSIIRMGPIWASGILLSTANVQQGTFSLQQARTMDRHLRGSFQIPPG 199
           PWRL T+HRVEELKS+IRMGPI ASGILL TA  QQGTFSLQQA+TM+RHL  SFQIP G
Sbjct: 318 PWRLSTIHRVEELKSVIRMGPIGASGILLITAYAQQGTFSLQQAKTMNRHLTKSFQIPAG 377

Query: 200 SMSVFTTVSMLTTITLYDRVLIRIARRYTGLDRGIT 307
           SMSVFTTV+MLTTI  YDR+ ++IARR+TGL+RGIT
Sbjct: 378 SMSVFTTVAMLTTIVFYDRIFVKIARRFTGLERGIT 413


>ref|NP_177024.1| putative nitrite transporter [Arabidopsis thaliana]
           gi|75266596|sp|Q9SX20.1|PTR18_ARATH RecName:
           Full=Probable nitrite transporter At1g68570
           gi|5734721|gb|AAD49986.1|AC008075_19 Similar to
           gb|AF023472 peptide transporter from Hordeum vulgare and
           is a member of the PF|00854 Peptide transporter family.
           ESTs gb|T41927 and gb|AA395024 come from this gene
           [Arabidopsis thaliana] gi|20147231|gb|AAM10330.1|
           At1g68570/F24J5_7 [Arabidopsis thaliana]
           gi|25090385|gb|AAN72289.1| At1g68570/F24J5_7
           [Arabidopsis thaliana] gi|110742209|dbj|BAE99031.1|
           peptide transporter like [Arabidopsis thaliana]
           gi|332196691|gb|AEE34812.1| putative nitrite transporter
           [Arabidopsis thaliana]
          Length = 596

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/95 (77%), Positives = 84/95 (88%)
 Frame = +2

Query: 23  WRLCTVHRVEELKSIIRMGPIWASGILLSTANVQQGTFSLQQARTMDRHLRGSFQIPPGS 202
           WRL TVHRVEELKS+IRMGPI ASGILL TA  QQGTFSLQQA+TM+RHL  SFQIP GS
Sbjct: 317 WRLSTVHRVEELKSVIRMGPIGASGILLITAYAQQGTFSLQQAKTMNRHLTNSFQIPAGS 376

Query: 203 MSVFTTVSMLTTITLYDRVLIRIARRYTGLDRGIT 307
           MSVFTTV+MLTTI  YDRV +++AR++TGL+RGIT
Sbjct: 377 MSVFTTVAMLTTIIFYDRVFVKVARKFTGLERGIT 411


Top