BLASTX nr result

ID: Coptis21_contig00019692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019692
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]          170   1e-40
ref|XP_002509531.1| chloride channel clc, putative [Ricinus comm...   169   2e-40
ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...   167   8e-40
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                 167   8e-40
emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]   167   8e-40

>gb|AAD29679.1|AF133209_1 CLC-Nt2 protein [Nicotiana tabacum]
          Length = 786

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/101 (81%), Positives = 93/101 (92%)
 Frame = +3

Query: 3   LILRTHLVTALSQKWFLTEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDL 182
           L+LRTHL+  L +KWFL E RRTEEWEVR+KFT +DLAER GKIE+V VTKDEMEM+VDL
Sbjct: 650 LVLRTHLLLVLKKKWFLHERRRTEEWEVREKFTWIDLAERGGKIEDVLVTKDEMEMYVDL 709

Query: 183 HPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAA 305
           HPLTNTTPYTVVES+SVAKA+VLFR+VGLRH+LIVPKYQAA
Sbjct: 710 HPLTNTTPYTVVESLSVAKAMVLFRQVGLRHMLIVPKYQAA 750


>ref|XP_002509531.1| chloride channel clc, putative [Ricinus communis]
           gi|223549430|gb|EEF50918.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 787

 Score =  169 bits (428), Expect = 2e-40
 Identities = 84/101 (83%), Positives = 92/101 (91%)
 Frame = +3

Query: 3   LILRTHLVTALSQKWFLTEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDL 182
           LILR HLV A+ +KWFL E RRTEEWEVRQKFT VDLAER  KIEEV VT+DEMEM+VDL
Sbjct: 651 LILRAHLVQAIKKKWFLREKRRTEEWEVRQKFTWVDLAERELKIEEVAVTRDEMEMYVDL 710

Query: 183 HPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAA 305
           HPLTNTTPYTVVESMSVAKA+VLFR+VGLRHLLIVPKY+A+
Sbjct: 711 HPLTNTTPYTVVESMSVAKAMVLFRQVGLRHLLIVPKYEAS 751


>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
           gi|296082356|emb|CBI21361.3| unnamed protein product
           [Vitis vinifera]
          Length = 789

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/101 (79%), Positives = 90/101 (89%)
 Frame = +3

Query: 3   LILRTHLVTALSQKWFLTEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDL 182
           ++LR HLV  L +KWFL E RRTEEWEVR+KFT ++LAER GK EEV VT DEMEM+VDL
Sbjct: 653 IVLRAHLVKVLKKKWFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYVDL 712

Query: 183 HPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAA 305
           HPLTNTTPYTVVESMSVAKA+VLFR+VGLRH+LIVPKYQAA
Sbjct: 713 HPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAA 753


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/101 (79%), Positives = 90/101 (89%)
 Frame = +3

Query: 3   LILRTHLVTALSQKWFLTEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDL 182
           ++LR HLV  L +KWFL E RRTEEWEVR+KFT ++LAER GK EEV VT DEMEM+VDL
Sbjct: 653 IVLRAHLVKVLKKKWFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYVDL 712

Query: 183 HPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAA 305
           HPLTNTTPYTVVESMSVAKA+VLFR+VGLRH+LIVPKYQAA
Sbjct: 713 HPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAA 753


>emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]
          Length = 753

 Score =  167 bits (423), Expect = 8e-40
 Identities = 80/101 (79%), Positives = 90/101 (89%)
 Frame = +3

Query: 3   LILRTHLVTALSQKWFLTEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDL 182
           ++LR HLV  L +KWFL E RRTEEWEVR+KFT ++LAER GK EEV VT DEMEM+VDL
Sbjct: 617 IVLRAHLVKVLKKKWFLQERRRTEEWEVREKFTWIELAEREGKFEEVAVTNDEMEMYVDL 676

Query: 183 HPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAA 305
           HPLTNTTPYTVVESMSVAKA+VLFR+VGLRH+LIVPKYQAA
Sbjct: 677 HPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAA 717


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