BLASTX nr result

ID: Coptis21_contig00019655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019655
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    73   3e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/90 (40%), Positives = 48/90 (53%)
 Frame = +2

Query: 107  EEDTIIWTPSQFGNFTTSSAYQALRREAPHVIWASLVWGKLVHPRHSFCTWQLFSNSLQT 286
            ++D IIW  S    F+   A++ LRR    V W  +VW K   PRHSF  W +    L T
Sbjct: 843  QKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTT 902

Query: 287  QDRLIQKKVLEHSRCCFCNNNNENSKHLFF 376
            QD+L +  +   +RC  C  NNE+  HLFF
Sbjct: 903  QDKLHRFGIHGPNRCSLCLRNNEDHNHLFF 932


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/90 (38%), Positives = 48/90 (53%)
 Frame = +2

Query: 107 EEDTIIWTPSQFGNFTTSSAYQALRREAPHVIWASLVWGKLVHPRHSFCTWQLFSNSLQT 286
           ++D I+W  S    F+   A++ LRR    V W  +VW K   PRHSF  W +    L T
Sbjct: 128 QKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTT 187

Query: 287 QDRLIQKKVLEHSRCCFCNNNNENSKHLFF 376
           QD+L +  +   +RC  C  NNE+  HLFF
Sbjct: 188 QDKLHRFGIHGPNRCSLCLRNNEDHNHLFF 217


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/90 (38%), Positives = 46/90 (51%)
 Frame = +2

Query: 107  EEDTIIWTPSQFGNFTTSSAYQALRREAPHVIWASLVWGKLVHPRHSFCTWQLFSNSLQT 286
            ++D I+W  S    F    A++ LRR    V W  +VW K   PRHSF  W      L T
Sbjct: 1183 QKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 1242

Query: 287  QDRLIQKKVLEHSRCCFCNNNNENSKHLFF 376
            QD+L +  +   +RC  C  NNE+  HLFF
Sbjct: 1243 QDKLYRFGIHGPNRCSLCLRNNEDHNHLFF 1272


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/85 (37%), Positives = 46/85 (54%)
 Frame = +2

Query: 122 IWTPSQFGNFTTSSAYQALRREAPHVIWASLVWGKLVHPRHSFCTWQLFSNSLQTQDRLI 301
           I T   FG+ T   AY+ +     HV+W   +W   + P  SF TW+L  N L T + L 
Sbjct: 9   ILTHISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLR 68

Query: 302 QKKVLEHSRCCFCNNNNENSKHLFF 376
           ++  L  S CCFC  + E+S+H+FF
Sbjct: 69  KRGCLIVSICCFCMKSAESSQHIFF 93


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/90 (37%), Positives = 47/90 (52%)
 Frame = +2

Query: 107 EEDTIIWTPSQFGNFTTSSAYQALRREAPHVIWASLVWGKLVHPRHSFCTWQLFSNSLQT 286
           ++D ++W  S    F+   A++ LRR    V W  +VW K   PRHSF  W      L T
Sbjct: 310 QKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 369

Query: 287 QDRLIQKKVLEHSRCCFCNNNNENSKHLFF 376
           QD+L +  +   +RC  C  NNE+  HLFF
Sbjct: 370 QDKLHRFGIHGPNRCSLCLRNNEDHNHLFF 399


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