BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019637
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    87   2e-15
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    82   5e-14
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    81   1e-13
ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13

>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = +3

Query: 102 SSRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGG--VCMICME 275
           SS      ST  ID  FD+D AL  P        E D  VA++PTV+S     VC ICME
Sbjct: 5   SSNSNSTFSTCLIDVSFDMDEALALPPNFGHQISESDSLVADMPTVTSTDDHDVCSICME 64

Query: 276 EFNRGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRVSI 395
            F       K++ C HVYH  C+S+WLS  NSCPLCR +I
Sbjct: 65  GFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCPLCRFNI 104


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 41/97 (42%), Positives = 59/97 (60%)
 Frame = +3

Query: 105 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 284
           S ++  M    ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F 
Sbjct: 5   SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 62

Query: 285 RGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRVSI 395
            G+   K+L C H YH  C+++WLS  NSCPLCR S+
Sbjct: 63  SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 41/97 (42%), Positives = 59/97 (60%)
 Frame = +3

Query: 105 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 284
           S ++  M    ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F 
Sbjct: 71  SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 128

Query: 285 RGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRVSI 395
            G+   K+L C H YH  C+++WLS  NSCPLCR S+
Sbjct: 129 SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 164


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +3

Query: 102 SSRDTPAMSTFSIDSCFDLDLALTTP---VQSSLVTKEPDFRVAELPTVSSIGGVCMICM 272
           +S +  A     I+S FDLD  LT          V   P   VAELPTV++   VC +CM
Sbjct: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62

Query: 273 EEFNRGKDVAKRLACNHVYHETCVSTWLSQNNSCPLCRVSI 395
           E+F   +   K++ C HVYH++C+S+WLS  +SCPLCR  I
Sbjct: 63  EDFLPDEG-GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 102


>ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +3

Query: 126 STFSIDSCFDLDLALTTPVQ-SSLVTKEPDFRVAELPTVSSIG-GVCMICMEEFNRGKDV 299
           S+  ID+ FDLD ALT P   S  +T      VA++PT  + G  VC +CME F  G   
Sbjct: 7   SSCLIDTSFDLDEALTLPQNLSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIG- 65

Query: 300 AKRLACNHVYHETCVSTWLSQNNSCPLCRVSI 395
            K++ C HVYHE C+S  LS  +SCPLCR  I
Sbjct: 66  GKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97