BLASTX nr result

ID: Coptis21_contig00019633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019633
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricin...   599   e-169
emb|CBI34844.3| unnamed protein product [Vitis vinifera]              593   e-167
ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259...   592   e-167
ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793...   591   e-166
ref|XP_004142844.1| PREDICTED: uncharacterized protein LOC101215...   573   e-161

>ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricinus communis]
            gi|223539387|gb|EEF40978.1| tRNA-pseudouridine synthase,
            putative [Ricinus communis]
          Length = 513

 Score =  599 bits (1545), Expect = e-169
 Identities = 309/427 (72%), Positives = 340/427 (79%), Gaps = 22/427 (5%)
 Frame = -1

Query: 1216 EEESHSGIEGWVDQKL--DKSXXXXXXXXXXRMYGXXXXXXXXXXXXDKYVELKQEVVDF 1043
            E ES  G++ WVDQKL  DKS          RMYG              +VELK EV  F
Sbjct: 85   EPESELGLDSWVDQKLSMDKSKRKYYNKRRKRMYGSDSDDDTRNKDEG-FVELKPEVAHF 143

Query: 1042 PRLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFI-HPGEDTKENKLG 866
              LHKREEELY YD FAYPWEKDKHYKMVYQLEKKYFPDQCFDKAF+ H   +  +N+  
Sbjct: 144  GSLHKREEELYMYDTFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFLDHKDSNFSKNESV 203

Query: 865  KS-------------GGEKKDKGIVFFEEGMSDKRDDVES--VKDVTDKKVEDFFKGLKK 731
            K              G  ++DKG+VFFEE  ++   + E    KDVT++KVE+FFK LKK
Sbjct: 204  KRSSKRVVKRDTNGVGDREEDKGLVFFEEEKAEIESNSEKNVAKDVTERKVEEFFKCLKK 263

Query: 730  VPSKTPE----EPYLLTRNTELPARWDSPRGTVVLVNKPKGWTSFTVCGKLRRLVKVQKV 563
            VP+K  E    EPYL+TR+TELP RWD   GTVVLVNKPKGWTSFTVCGKLRRLVKV+KV
Sbjct: 264  VPNKKNEIDTGEPYLVTRSTELPPRWDDTHGTVVLVNKPKGWTSFTVCGKLRRLVKVKKV 323

Query: 562  GHAGTLDPMATGLLIVCVGKATKVVDRFQGMIKGYSGVFRLGEATSTWDADSPVIQREPW 383
            GHAGTLDPMATGLLIVCVGKATKVVDR+QGMIKGYSGVFRLGEATSTWDADSPVIQREPW
Sbjct: 324  GHAGTLDPMATGLLIVCVGKATKVVDRYQGMIKGYSGVFRLGEATSTWDADSPVIQREPW 383

Query: 382  EHIKDEDIKKNAASFSGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRQISIFQFDI 203
            EHIKDEDI+K AASF GEIWQVPPMFSAIKVGGEKMY+KARRGE++ELSPR+ISIFQF+I
Sbjct: 384  EHIKDEDIRKAAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFNI 443

Query: 202  ERSLNNRQNLIFRVSCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSVDDAWEFQE 23
            ERSL +RQNLIFRV CSKGTY+RSLCADFGKALGSCAHLTALRRDSIG+YS DDAWEF+E
Sbjct: 444  ERSLEDRQNLIFRVVCSKGTYVRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWEFKE 503

Query: 22   LEEAITK 2
            LEEAITK
Sbjct: 504  LEEAITK 510


>emb|CBI34844.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  593 bits (1530), Expect = e-167
 Identities = 298/417 (71%), Positives = 336/417 (80%), Gaps = 12/417 (2%)
 Frame = -1

Query: 1216 EEESHSGIEGWVDQKL--------DKSXXXXXXXXXXRMYGXXXXXXXXXXXXDKYVELK 1061
            E     G E WVD+KL        DK+          RMYG             KYVELK
Sbjct: 88   ESPDSEGFENWVDRKLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDGGAAQE-KYVELK 146

Query: 1060 QEVVDFPRLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFIHPGEDTK 881
            QEVV+   LHK+EEELYFYDAFAYPWEK+KHYKMVYQLEKKYFPD C DKAF+ PGE T 
Sbjct: 147  QEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGE-TN 205

Query: 880  ENKLGKSGGEKKDKGIVFFEEGMSDKRDDVESVKDVTDKKVEDFFKGLKKVPSKTPE--- 710
            E ++G  G    DKG+VFFE    +K       K++++KKVE+FFK LKKVP+K  E   
Sbjct: 206  EKEIGDGGD---DKGLVFFEGEKDEKVSVSAKEKELSEKKVEEFFKCLKKVPNKDVEGDR 262

Query: 709  -EPYLLTRNTELPARWDSPRGTVVLVNKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMA 533
             EPY +TR++ELP RWD P GTVVL+NKPKGWTSFTVCGKLRRLV+V+KVGHAGTLDPMA
Sbjct: 263  GEPYFVTRSSELPPRWDGPSGTVVLINKPKGWTSFTVCGKLRRLVQVKKVGHAGTLDPMA 322

Query: 532  TGLLIVCVGKATKVVDRFQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKK 353
            TGLLIVCVGKATK+V+ +QGM+KGYSG+FRLGEATSTWDADSPVIQREPWEHIKDE+IKK
Sbjct: 323  TGLLIVCVGKATKLVESYQGMVKGYSGIFRLGEATSTWDADSPVIQREPWEHIKDENIKK 382

Query: 352  NAASFSGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRQISIFQFDIERSLNNRQNL 173
             AASF GEIWQVPPMFSAIKVGGEKMY+KARRGE+VELSPR+ISIF+FDIERSL++RQNL
Sbjct: 383  TAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESVELSPRRISIFKFDIERSLDDRQNL 442

Query: 172  IFRVSCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSVDDAWEFQELEEAITK 2
            +FRV+CSKGTYIRSLCADFGKALGSCAHL ALRRDSIG YS DDAWEF++LEEAITK
Sbjct: 443  VFRVTCSKGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDAWEFKDLEEAITK 499


>ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259460 [Vitis vinifera]
          Length = 520

 Score =  592 bits (1526), Expect = e-167
 Identities = 301/432 (69%), Positives = 341/432 (78%), Gaps = 27/432 (6%)
 Frame = -1

Query: 1216 EEESHSGIEGWVDQKL--------DKSXXXXXXXXXXRMYGXXXXXXXXXXXXDKYVELK 1061
            E     G E WVD+KL        DK+          RMYG             KYVELK
Sbjct: 88   ESPDSEGFENWVDRKLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDGGAAQE-KYVELK 146

Query: 1060 QEVVDFPRLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFIHPGEDTK 881
            QEVV+   LHK+EEELYFYDAFAYPWEK+KHYKMVYQLEKKYFPD C DKAF+ PGE  +
Sbjct: 147  QEVVELRTLHKKEEELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGETNE 206

Query: 880  -------ENKLGKSGGEKK--------DKGIVFFEEGMSDKRDDVESVKDVTDKKVEDFF 746
                   + K+GK GGEK+        DKG+VFFE    +K       K++++KKVE+FF
Sbjct: 207  SANNAKAKKKVGK-GGEKREEIGDGGDDKGLVFFEGEKDEKVSVSAKEKELSEKKVEEFF 265

Query: 745  KGLKKVPSKTPE----EPYLLTRNTELPARWDSPRGTVVLVNKPKGWTSFTVCGKLRRLV 578
            K LKKVP+K  E    EPY +TR++ELP RWD P GTVVL+NKPKGWTSFTVCGKLRRLV
Sbjct: 266  KCLKKVPNKDVEGDRGEPYFVTRSSELPPRWDGPSGTVVLINKPKGWTSFTVCGKLRRLV 325

Query: 577  KVQKVGHAGTLDPMATGLLIVCVGKATKVVDRFQGMIKGYSGVFRLGEATSTWDADSPVI 398
            +V+KVGHAGTLDPMATGLLIVCVGKATK+V+ +QGM+KGYSG+FRLGEATSTWDADSPVI
Sbjct: 326  QVKKVGHAGTLDPMATGLLIVCVGKATKLVESYQGMVKGYSGIFRLGEATSTWDADSPVI 385

Query: 397  QREPWEHIKDEDIKKNAASFSGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRQISI 218
            QREPWEHIKDE+IKK AASF GEIWQVPPMFSAIKVGGEKMY+KARRGE+VELSPR+ISI
Sbjct: 386  QREPWEHIKDENIKKTAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESVELSPRRISI 445

Query: 217  FQFDIERSLNNRQNLIFRVSCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSVDDA 38
            F+FDIERSL++RQNL+FRV+CSKGTYIRSLCADFGKALGSCAHL ALRRDSIG YS DDA
Sbjct: 446  FKFDIERSLDDRQNLVFRVTCSKGTYIRSLCADFGKALGSCAHLAALRRDSIGPYSADDA 505

Query: 37   WEFQELEEAITK 2
            WEF++LEEAITK
Sbjct: 506  WEFKDLEEAITK 517


>ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793939 [Glycine max]
          Length = 485

 Score =  591 bits (1524), Expect = e-166
 Identities = 294/373 (78%), Positives = 322/373 (86%), Gaps = 15/373 (4%)
 Frame = -1

Query: 1075 YVELKQEVVDFPRLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFIHP 896
            +VELK EVVDFP LHKREEELYFYDAF YPWEKDKHYKMVYQLEKKYFPDQC DKAF+ P
Sbjct: 111  FVELKPEVVDFPTLHKREEELYFYDAFTYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLQP 170

Query: 895  GEDTKENKLGKSGGEKKDKG-------IVFFEEGMSDKRDDVESV--KDVTDKKVEDFFK 743
            G+ +  N  GK  G KK  G       +VFFEEG  +++ +      + + +KKVEDFFK
Sbjct: 171  GQ-SNANANGKGKGRKKVVGGGGGEEKLVFFEEGNVEEKGEESGSGSRQLKEKKVEDFFK 229

Query: 742  GLKKVPSKTPE------EPYLLTRNTELPARWDSPRGTVVLVNKPKGWTSFTVCGKLRRL 581
            GLKK PS +        EP+L +R T LP  WD+P GTV+LVNKPKGWTSFTVCGKLRRL
Sbjct: 230  GLKKDPSPSLNKDVQVGEPFLSSRRTGLPPVWDTPHGTVLLVNKPKGWTSFTVCGKLRRL 289

Query: 580  VKVQKVGHAGTLDPMATGLLIVCVGKATKVVDRFQGMIKGYSGVFRLGEATSTWDADSPV 401
            VKV+KVGHAGTLDPMATGLLIVCVGKATK+VDR+QGMIKGYSGVFRLGEATSTWDADSPV
Sbjct: 290  VKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPV 349

Query: 400  IQREPWEHIKDEDIKKNAASFSGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRQIS 221
            IQREPWEHIKDEDIK+NA SFSGEIWQVPPMFSAIKVGGEKMY+KARRGE++ELSPR+IS
Sbjct: 350  IQREPWEHIKDEDIKRNALSFSGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRIS 409

Query: 220  IFQFDIERSLNNRQNLIFRVSCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSVDD 41
            IFQFDIERSL++RQNLIFRV+CSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYS DD
Sbjct: 410  IFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGQYSADD 469

Query: 40   AWEFQELEEAITK 2
            AWEFQELEEAITK
Sbjct: 470  AWEFQELEEAITK 482


>ref|XP_004142844.1| PREDICTED: uncharacterized protein LOC101215528 [Cucumis sativus]
          Length = 544

 Score =  573 bits (1478), Expect = e-161
 Identities = 299/445 (67%), Positives = 339/445 (76%), Gaps = 38/445 (8%)
 Frame = -1

Query: 1222 ANEEESHSGIEGWVDQKL---------------DKSXXXXXXXXXXRMYGXXXXXXXXXX 1088
            + +  S  G + WVD+KL               DK+          RMYG          
Sbjct: 99   SEDPTSELGFDSWVDRKLISEGGTVSGKEGVVMDKAMRKYYNKRRKRMYGSDSDEDNRTQ 158

Query: 1087 XXDKYVELKQEVVDFPRLHKREEELYFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDKA 908
                +VELK EVV+F  LHKREEEL+F+DAFAYPWEKDKHYKM+YQLEKKYFPD   DKA
Sbjct: 159  AEG-FVELKPEVVEFNTLHKREEELFFHDAFAYPWEKDKHYKMLYQLEKKYFPDDGLDKA 217

Query: 907  FIHPGE---DTKENKLGKSGGEKK----------------DKGIVFFEEGMSDKRDDVES 785
            F+ PGE   +  E   G+ G  K                 DK +VFF+EG  +K ++  S
Sbjct: 218  FLGPGESNVEVNEQTKGRQGVRKAGRVKPEMNVEVANGMDDKRMVFFDEGKPEK-ENKGS 276

Query: 784  VKDVTDKKVEDFFKGLKKVPSKTPE----EPYLLTRNTELPARWDSPRGTVVLVNKPKGW 617
            V DV++KKVE+FFK LKK P+K       EPYLLTR+ ELPA+WDSP GTVVL+NKPKGW
Sbjct: 277  VVDVSEKKVEEFFKCLKKGPAKDSNIGQGEPYLLTRHMELPAKWDSPCGTVVLLNKPKGW 336

Query: 616  TSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCVGKATKVVDRFQGMIKGYSGVFRLG 437
            TSFTVCGKLRRLVKV+KVGHAGTLDPMATGLLIVCVGKATK+VDR+QGMIK YSGVFRLG
Sbjct: 337  TSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKSYSGVFRLG 396

Query: 436  EATSTWDADSPVIQREPWEHIKDEDIKKNAASFSGEIWQVPPMFSAIKVGGEKMYDKARR 257
            EATSTWDADSPVIQREPWEHIKD+DI+K AASF GEIWQVPPMFSAIKVGGE+MY+KARR
Sbjct: 397  EATSTWDADSPVIQREPWEHIKDDDIQKAAASFCGEIWQVPPMFSAIKVGGERMYEKARR 456

Query: 256  GETVELSPRQISIFQFDIERSLNNRQNLIFRVSCSKGTYIRSLCADFGKALGSCAHLTAL 77
            GE++ELSPRQISIF+FDIERSL++RQNLIFRV+CSKGTYIRSLCAD GK LGSCAHLTAL
Sbjct: 457  GESIELSPRQISIFKFDIERSLDDRQNLIFRVTCSKGTYIRSLCADLGKTLGSCAHLTAL 516

Query: 76   RRDSIGQYSVDDAWEFQELEEAITK 2
            RRDSIGQY  DDAWEF+ELE+AITK
Sbjct: 517  RRDSIGQYLADDAWEFKELEDAITK 541


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