BLASTX nr result

ID: Coptis21_contig00019632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019632
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|2...   291   1e-76
ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250...   274   2e-71
ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805...   273   3e-71
ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804...   271   8e-71
ref|XP_002534606.1| structural constituent of ribosome, putative...   271   1e-70

>ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|222857955|gb|EEE95502.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  291 bits (744), Expect = 1e-76
 Identities = 151/187 (80%), Positives = 160/187 (85%), Gaps = 4/187 (2%)
 Frame = -2

Query: 633 MLNQVLSKVCNKG----SGDKIMPCLYMLTSGFHQGQVCFAPRSFFGVEDFLDDDNSRPY 466
           ML QV  KV NKG     GDK+ P LY+  +GFH GQ   APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQVFGKVLNKGFFANGGDKLRPGLYVPNTGFHNGQAHCAPRSFFGVEDFLDDDNSRPY 60

Query: 465 TFXXXXXXXXXXKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 286
           T+          KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNSK
Sbjct: 61  TYQKGKKSKNPNKHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 285 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 106
           DIKAVLKSRSDIPACL+VGQILADRAREADVYTA+YTPRERDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 180

Query: 105 DVKVYLD 85
           DVK+YLD
Sbjct: 181 DVKIYLD 187


>ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250278 [Vitis vinifera]
           gi|298204993|emb|CBI34300.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  274 bits (700), Expect = 2e-71
 Identities = 141/187 (75%), Positives = 156/187 (83%), Gaps = 4/187 (2%)
 Frame = -2

Query: 633 MLNQVLSKVCNKG----SGDKIMPCLYMLTSGFHQGQVCFAPRSFFGVEDFLDDDNSRPY 466
           ML  +  K+  KG      D+  PCLY+ TSGFH G+   APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKHLSGKLWIKGVWANGRDQFRPCLYVPTSGFHNGKAHLAPRSFFGVEDFLDDDNSRPY 60

Query: 465 TFXXXXXXXXXXKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 286
           T+          KH+SFKQRT AYMEPFTLDV ISKRFVSASLTHRVTS+QVAVAGTNSK
Sbjct: 61  TYQKEKKSKNPNKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 285 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 106
           DIKAVLKSRSDIPACL++G+IL++RAREADVYTA+YTPR+RDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGI 180

Query: 105 DVKVYLD 85
           DVKVYLD
Sbjct: 181 DVKVYLD 187


>ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805468 [Glycine max]
          Length = 202

 Score =  273 bits (698), Expect = 3e-71
 Identities = 135/194 (69%), Positives = 161/194 (82%), Gaps = 4/194 (2%)
 Frame = -2

Query: 654 C*GLKKIMLNQVLSKVCNKG----SGDKIMPCLYMLTSGFHQGQVCFAPRSFFGVEDFLD 487
           C  + + ML QV+ ++C        G++++P +Y+ +  FH GQ   APRSFFGVEDFLD
Sbjct: 9   CYWVLRNMLKQVIGRICRTDVYACEGNRVLPWIYVPSCFFHHGQAHMAPRSFFGVEDFLD 68

Query: 486 DDNSRPYTFXXXXXXXXXXKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVA 307
           DDNSRPYT+          KH+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTS+QVA
Sbjct: 69  DDNSRPYTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVA 128

Query: 306 VAGTNSKDIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQ 127
           VAGTNSKDIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTPR+RDKFEGKIRAVVQ
Sbjct: 129 VAGTNSKDIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQ 188

Query: 126 SLIDNGIDVKVYLD 85
           SLIDNGID+KVYLD
Sbjct: 189 SLIDNGIDIKVYLD 202


>ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804348 [Glycine max]
          Length = 187

 Score =  271 bits (694), Expect = 8e-71
 Identities = 134/187 (71%), Positives = 158/187 (84%), Gaps = 4/187 (2%)
 Frame = -2

Query: 633 MLNQVLSKVCNKG----SGDKIMPCLYMLTSGFHQGQVCFAPRSFFGVEDFLDDDNSRPY 466
           ML Q + ++   G     G++++P +Y+ +S FH GQ   APRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQAIGRIFRTGVYACEGNRVLPWIYVPSSFFHHGQAHMAPRSFFGVEDFLDDDNSRPY 60

Query: 465 TFXXXXXXXXXXKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 286
           T+          KH+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNSK
Sbjct: 61  TYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120

Query: 285 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNGI 106
           DIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTPR+RDKFEGKIRAVVQSLIDNGI
Sbjct: 121 DIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGI 180

Query: 105 DVKVYLD 85
           D+KVYLD
Sbjct: 181 DIKVYLD 187


>ref|XP_002534606.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223524931|gb|EEF27777.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 188

 Score =  271 bits (692), Expect = 1e-70
 Identities = 140/188 (74%), Positives = 158/188 (84%), Gaps = 5/188 (2%)
 Frame = -2

Query: 633 MLNQVLSKVCNKG----SGDKIMPCLYMLTSGFHQGQVCFAPRSFFGVEDFLDDDNSRPY 466
           ML QVL K+ ++G     GDK+   LY+  S FH GQV ++PRSFFGVEDFLDDDNSRPY
Sbjct: 1   MLKQVLGKIIHRGPFLNGGDKLRLSLYVPGSCFHNGQVHYSPRSFFGVEDFLDDDNSRPY 60

Query: 465 TFXXXXXXXXXXK-HVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNS 289
           T+            H+SFKQRT AYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNS
Sbjct: 61  TYQKEKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120

Query: 288 KDIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTPRERDKFEGKIRAVVQSLIDNG 109
           KDIKA L+SRSDIPACL++G+IL++RAREADVYTA+YTPRERDKFEGKIRAVVQSLIDNG
Sbjct: 121 KDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180

Query: 108 IDVKVYLD 85
           ID+KVYLD
Sbjct: 181 IDIKVYLD 188


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