BLASTX nr result

ID: Coptis21_contig00019631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019631
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...   174   2e-41
emb|CBI18563.3| unnamed protein product [Vitis vinifera]              174   2e-41
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]   174   2e-41
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...   165   8e-39
ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu...   159   4e-37

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score =  174 bits (440), Expect = 2e-41
 Identities = 83/117 (70%), Positives = 87/117 (74%)
 Frame = +1

Query: 217 AENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 396
           +ENLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 61  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 120

Query: 397 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNSQSQLLAFLRAT 567
                             +I KS LG GFD E PSNPILW SPQN  S LLA LRAT
Sbjct: 121 VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT 175


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  174 bits (440), Expect = 2e-41
 Identities = 83/117 (70%), Positives = 87/117 (74%)
 Frame = +1

Query: 217 AENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 396
           +ENLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 134 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 193

Query: 397 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNSQSQLLAFLRAT 567
                             +I KS LG GFD E PSNPILW SPQN  S LLA LRAT
Sbjct: 194 VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT 248


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score =  174 bits (440), Expect = 2e-41
 Identities = 83/117 (70%), Positives = 87/117 (74%)
 Frame = +1

Query: 217 AENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 396
           +ENLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T 
Sbjct: 61  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTS 120

Query: 397 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNSQSQLLAFLRAT 567
                             +I KS LG GFD E PSNPILW SPQN  S LLA LRAT
Sbjct: 121 VSTAVGKSSAGKAKSAVSEIGKSGLGGGFDHEIPSNPILWASPQN--SHLLALLRAT 175


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score =  165 bits (417), Expect = 8e-39
 Identities = 77/116 (66%), Positives = 85/116 (73%)
 Frame = +1

Query: 220 ENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTIX 399
           ENLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T  
Sbjct: 63  ENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSV 122

Query: 400 XXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQPSNPILWGSPQNSQSQLLAFLRAT 567
                            DI +S  G+GF+ E  S+PI+W SPQN  S +LA LRAT
Sbjct: 123 SASVGKSGTNKMKTMASDIGRSGFGNGFEHELSSSPIMWASPQN--SHILALLRAT 176


>ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis]
           gi|223538418|gb|EEF40024.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 335

 Score =  159 bits (402), Expect = 4e-37
 Identities = 76/117 (64%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
 Frame = +1

Query: 217 AENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKGTI 396
           +ENLRCPRCDS+NTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK+K T+
Sbjct: 66  SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTV 125

Query: 397 XXXXXXXXXXXXXXXXXXDIVKSSLGSGFDQEQP-SNPILWGSPQNSQSQLLAFLRA 564
                             +I +SS G+ FD E P S+PI+W SP N  S LL  LRA
Sbjct: 126 VSASVAKSSNNKMKTMVSEIGRSSFGNVFDHELPSSSPIMWASPHN--SHLLTLLRA 180


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