BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019596
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-112
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   391   e-106
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   389   e-106
gb|AFK46902.1| unknown [Medicago truncatula]                          382   e-103
ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   378   e-102

>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  409 bits (1052), Expect = e-112
 Identities = 205/321 (63%), Positives = 242/321 (75%)
 Frame = +2

Query: 2    GQGWLGKGEWSVLKSRITSEGDCLSCGERLVCVDIDRAETEKFAESIAALATERESKSDF 181
            GQGW+GKG+W V ++++ S G C SC E+L  VDIDRAETE F ES+AA+A ERE +S+F
Sbjct: 236  GQGWIGKGKWLVCRAKVDSSGQCGSCREQLATVDIDRAETETFLESVAAMAMEREVRSNF 295

Query: 182  MIFQKWLDNNTKYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYVRNDKKWPLVILH 361
              FQ WLD +  YEAIVDGAN+GLYQQNFA+G FSI QLDAVVKELY R+ KK PLVILH
Sbjct: 296  REFQDWLDKHADYEAIVDGANIGLYQQNFANGEFSIPQLDAVVKELYDRSQKKRPLVILH 355

Query: 362  NKRVRSLMGNPSNRKLLEEWQTQDTLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 541
            NKR R L  N SNRKLL+EW TQ  LYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI
Sbjct: 356  NKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 415

Query: 542  FELLGSNFFLKWKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELL 721
            FELLGS+FFLKWKERH+V++ F+K N++L+MPPSYSL IQES KG+WHVPV  ESSDE L
Sbjct: 416  FELLGSSFFLKWKERHQVRYTFVKGNVKLLMPPSYSLFIQESVKGTWHVPVASESSDESL 475

Query: 722  RTWLCITRPSHHECSDEVLISSHAHVVDKPFSSNSMLPSLCGARTDRTVNSSHSIPTLSQ 901
            RTW CITRPS HE + +  ++     +D+    +  L S    +++   N S        
Sbjct: 476  RTWHCITRPSSHELNGKASVNLETCEIDRQEQCDFKLSS---CKSEGLRNGS-------- 524

Query: 902  CPNDESMTTTGKRKDRSPCSS 964
            C N ++ T TGKRKDRSP  S
Sbjct: 525  CEN-KTTTMTGKRKDRSPSPS 544


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 530

 Score =  391 bits (1004), Expect = e-106
 Identities = 193/321 (60%), Positives = 230/321 (71%), Gaps = 1/321 (0%)
 Frame = +2

Query: 2    GQGWLGKGEWSVLKSRITSEGDCLSCGERLVCVDIDRAETEKFAESIAALATERESKSDF 181
            GQGW+GKG+W V ++ + ++G C  CGE+LVCVDID AE EKFA S+AALA ERE K++F
Sbjct: 243  GQGWVGKGDWVVSRTSVGADGHCCCCGEQLVCVDIDDAEREKFAGSVAALAFEREVKANF 302

Query: 182  MIFQKWLDNNTKYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYVRNDKKWPLVILH 361
              FQ WL+ +  YEAIVDGAN+GLYQQNFADGGFSISQLD VVKELY R+ KKWPLV+LH
Sbjct: 303  SEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFSISQLDDVVKELYNRSGKKWPLVVLH 362

Query: 362  NKRVRSLMGNPSNRKLLEEWQTQDTLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 541
            NKR+R LM NPS+R+L+EEW     LYTTPNGSNDDWYWL+AAVKL+CLLVTNDEMRDHI
Sbjct: 363  NKRLRGLMENPSSRRLVEEWMNNGALYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHI 422

Query: 542  FELLGSNFFLKWKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELL 721
            FEL+GSNFF +WKERH+V + F+K NL+L MPPSYSLVIQESEKG WHVP+   +S E  
Sbjct: 423  FELIGSNFFNQWKERHQVHYTFVKGNLKLQMPPSYSLVIQESEKGYWHVPLAPGTSCEST 482

Query: 722  RTWLCITRPSHHECSDEVLISSHAHVVDKPFSSNSMLPSLCGARTDRTVNSSHSIPTL-S 898
            R WLCITRP  H                                 D     S+ + +L S
Sbjct: 483  RCWLCITRPCGH---------------------------------DVVATVSNGVSSLDS 509

Query: 899  QCPNDESMTTTGKRKDRSPCS 961
            Q   + + + TGKRK+RSP S
Sbjct: 510  QVDENNATSVTGKRKERSPPS 530


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Glycine max]
          Length = 550

 Score =  389 bits (1000), Expect = e-106
 Identities = 182/275 (66%), Positives = 218/275 (79%)
 Frame = +2

Query: 2    GQGWLGKGEWSVLKSRITSEGDCLSCGERLVCVDIDRAETEKFAESIAALATERESKSDF 181
            GQGW+GKG+W V ++ + ++G C  CG++LVCVDID  ETEKFA S+AALA ERE K++F
Sbjct: 242  GQGWVGKGDWVVSRTSVVADGHCCCCGQQLVCVDIDDVETEKFAGSVAALAFEREVKANF 301

Query: 182  MIFQKWLDNNTKYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYVRNDKKWPLVILH 361
              FQ WL+ +  YEAIVDGAN+GLYQQNFADGGF+ISQLD VVKELY R+ KKWPLV+LH
Sbjct: 302  SEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFNISQLDDVVKELYNRSGKKWPLVVLH 361

Query: 362  NKRVRSLMGNPSNRKLLEEWQTQDTLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 541
            NKR+R LM NPS+R+L+EEW     LYTTPNGSNDDWYWL+AAVKL+CLLVTNDEMRDHI
Sbjct: 362  NKRLRGLMENPSSRRLVEEWMKNGVLYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHI 421

Query: 542  FELLGSNFFLKWKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELL 721
            FEL+GSNFF +WKERH+V + F+K NL+L MPPSYSLVIQESEKG WHVP+   +S E  
Sbjct: 422  FELIGSNFFNQWKERHQVHYTFVKGNLKLQMPPSYSLVIQESEKGYWHVPLVSGTSCEST 481

Query: 722  RTWLCITRPSHHECSDEVLISSHAHVVDKPFSSNS 826
            R WLCITRPS H+      +S+    +D     NS
Sbjct: 482  RCWLCITRPSGHDA--VATVSNGVSSLDSQVDENS 514


>gb|AFK46902.1| unknown [Medicago truncatula]
          Length = 392

 Score =  382 bits (980), Expect = e-103
 Identities = 192/321 (59%), Positives = 232/321 (72%), Gaps = 4/321 (1%)
 Frame = +2

Query: 2   GQGWLGKGEWSVLKSRITSEGDCLSCGERLVCVDIDRAETEKFAESIAALATERESKSDF 181
           G GW+GKG+W V +  +  +G C  CGE+LVCVDID  E EKFA S+AALA ERE K++F
Sbjct: 86  GLGWVGKGDWVVSRMSVDDDGICCGCGEQLVCVDIDDEEMEKFASSVAALAVEREVKANF 145

Query: 182 MIFQKWLDNNTKYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYVRNDKKWPLVILH 361
             FQ WL+ +  YEAIVDGANVGLYQQNFADGGFS +QLD VVKELY ++ +KWPLV+LH
Sbjct: 146 SEFQGWLEKHGCYEAIVDGANVGLYQQNFADGGFSTNQLDDVVKELYNQSGRKWPLVVLH 205

Query: 362 NKRVRSLMGNPSNRKLLEEWQTQDTLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 541
           NKRV+ LM NPS+RKL+EEW     LYTTPNGSNDDWYWLYA VKL+CLLVTNDEMRDHI
Sbjct: 206 NKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSNDDWYWLYATVKLRCLLVTNDEMRDHI 265

Query: 542 FELLGSNFFLKWKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELL 721
           FELLGSNFF +WKERH+V + F+K NL+L MPP YSLVIQESEKGSWHVP+  ++S+E  
Sbjct: 266 FELLGSNFFNQWKERHQVHYTFVKGNLKLQMPPPYSLVIQESEKGSWHVPLAVDTSNESS 325

Query: 722 RTWLCITRPSHHE---CSDEVLISSHAHV-VDKPFSSNSMLPSLCGARTDRTVNSSHSIP 889
           + WLCITR S  +    S+ V  S + H+ +D+P      + SL                
Sbjct: 326 KPWLCITRASADDATTASNGVDTSGNNHIHIDQPQKIADEVLSLD--------------- 370

Query: 890 TLSQCPNDESMTTTGKRKDRS 952
             SQ   + S + TGKRK+RS
Sbjct: 371 --SQVIENNSTSVTGKRKERS 389


>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223531469|gb|EEF33301.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 561

 Score =  378 bits (971), Expect = e-102
 Identities = 190/324 (58%), Positives = 235/324 (72%), Gaps = 3/324 (0%)
 Frame = +2

Query: 2    GQGWLGKGEWSVLKSRITSEGDCLSCGERLVCVDIDRAETEKFAESIAALATERESKSDF 181
            G GW+ KG+W V +  +  +G C  CGE L CVDID  ETE+FA S+A LA ERE K++F
Sbjct: 245  GLGWIEKGKWGVKRGNMDMDGRCCCCGESLACVDIDDLETERFAGSLAGLAMEREVKANF 304

Query: 182  MIFQKWLDNNTKYEAIVDGANVGLYQQNFADGGFSISQLDAVVKELYVRNDKKWPLVILH 361
              FQ WLD N  Y+AIVDGANVGLYQQNFA+GGFSISQLDAVVKELY R+ K WPL++LH
Sbjct: 305  SEFQDWLDKNADYDAIVDGANVGLYQQNFAEGGFSISQLDAVVKELYDRSGK-WPLIVLH 363

Query: 362  NKRVRSLMGNPSNRKLLEEWQTQDTLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 541
            NKRVR+++ NPS R L++EW  +D LYTTP+GSNDDWYWLYAAVKLKCLLVTNDEMRDHI
Sbjct: 364  NKRVRAILENPSQRNLIQEWTEKDILYTTPHGSNDDWYWLYAAVKLKCLLVTNDEMRDHI 423

Query: 542  FELLGSNFFLKWKERHRVQFNFLKSNLRLVMPPSYSLVIQESEKGSWHVPVEGESSDELL 721
            FELLGS+FFLKWKERH+V++ F+K  L+L MPP +S++IQESEKGSWHVP+ G+ +++  
Sbjct: 424  FELLGSSFFLKWKERHQVRYTFVKGKLKLQMPPPFSVLIQESEKGSWHVPIAGDGNEDSA 483

Query: 722  RTWLCITRPS--HHECSDEVLISS-HAHVVDKPFSSNSMLPSLCGARTDRTVNSSHSIPT 892
            ++WLCITR S  +    DE+ I +      D+   S S   S+ G   +  ++S  S P 
Sbjct: 484  QSWLCITRSSACYAPDKDEMNIETFETEYQDRILLSPSKANSITG--YNDILDSEESFPH 541

Query: 893  LSQCPNDESMTTTGKRKDRSPCSS 964
                P     T TGKRK RS   S
Sbjct: 542  SENKP----ATPTGKRKGRSTSPS 561