BLASTX nr result

ID: Coptis21_contig00019567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019567
         (1571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   544   e-152
emb|CBI30713.3| unnamed protein product [Vitis vinifera]              523   e-146
ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi...   491   e-136
ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   486   e-135
ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose sy...   485   e-134

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
            [Vitis vinifera]
          Length = 1360

 Score =  544 bits (1402), Expect = e-152
 Identities = 261/365 (71%), Positives = 310/365 (84%), Gaps = 4/365 (1%)
 Frame = +3

Query: 15   MMKPRRLKGHKKTVSCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLEKKPISSI 194
            M + RRL+GHK T +CCIASR RPGL+ATS EDGCICWFDMRCKDVV TMDL   PISS+
Sbjct: 1    MAEARRLRGHKATATCCIASRDRPGLVATSGEDGCICWFDMRCKDVVLTMDLGVNPISSL 60

Query: 195  CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNYNKEEINQISCNSKSSFLAAADDS 374
            CF  GNEDI+Y  SG+EV  FDV++A +WKPLE+YNYNKEEINQI+CNSKSSFLA+ADD 
Sbjct: 61   CFKPGNEDIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDD 120

Query: 375  GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 554
            G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121  GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 555  MDFGLPDLESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 734
            +DFG+PD+E+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181  VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 735  SSKLKSSIRPRTGSQS---SSGNVKPAASTTTLVQESGKRLHLDNSLGGHTAAVSCVSFS 905
            +++ K+S +P+ GS+S   S G+V   A   TL Q   +RLHLD SLGGHTA+VSCV+F+
Sbjct: 241  AAQSKTSSKPQRGSKSRSKSKGSVSTVAE--TLNQNGRRRLHLDYSLGGHTASVSCVAFA 298

Query: 906  LFAERGRYIISGGNDASVKVWDWSKHRDAVETSRTN-LLVQNISLSKKVNWLCTTPSDSE 1082
            LF ERG+ IISGGND +VKVWD S++ DA + S +N +L  NI+LSKKVNWLCTTP+DSE
Sbjct: 299  LFGERGKSIISGGNDKTVKVWDCSRYLDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSE 358

Query: 1083 NLVVC 1097
            NLVVC
Sbjct: 359  NLVVC 363


>emb|CBI30713.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  523 bits (1348), Expect = e-146
 Identities = 251/362 (69%), Positives = 296/362 (81%), Gaps = 1/362 (0%)
 Frame = +3

Query: 15   MMKPRRLKGHKKTVSCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLEKKPISSI 194
            M + RRL+GHK T +CCIASR RPGL+ATS EDGCICWFDMRCKDVV TMDL   PISS+
Sbjct: 1    MAEARRLRGHKATATCCIASRDRPGLVATSGEDGCICWFDMRCKDVVLTMDLGVNPISSL 60

Query: 195  CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNYNKEEINQISCNSKSSFLAAADDS 374
            CF  GNEDI+Y  SG+EV  FDV++A +WKPLE+YNYNKEEINQI+CNSKSSFLA+ADD 
Sbjct: 61   CFKPGNEDIIYVSSGSEVKCFDVHLADAWKPLESYNYNKEEINQIACNSKSSFLASADDD 120

Query: 375  GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 554
            G +KIIDIRQ CL+KTLRSGHTSICSSV+FLPWRPWEVITGGLD+KLVMWDFSKGRP KI
Sbjct: 121  GDVKIIDIRQKCLFKTLRSGHTSICSSVKFLPWRPWEVITGGLDSKLVMWDFSKGRPYKI 180

Query: 555  MDFGLPDLESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 734
            +DFG+PD+E+  S GQC NPAF+HA+A+PEVDML+KSGK+C VARGDGVVDVI+IESE+A
Sbjct: 181  VDFGMPDMENSSSAGQCLNPAFVHAIAVPEVDMLEKSGKICVVARGDGVVDVINIESELA 240

Query: 735  SSKLKSSIRPRTGSQSSSGNVKPAASTTTLVQESGKRLHLDNSLGGHTAAVSCVSFSLFA 914
            ++ +                   +    TL Q   +RLHLD SLGGHTA+VSCV+F+LF 
Sbjct: 241  AAHV-------------------STVAETLNQNGRRRLHLDYSLGGHTASVSCVAFALFG 281

Query: 915  ERGRYIISGGNDASVKVWDWSKHRDAVETSRTN-LLVQNISLSKKVNWLCTTPSDSENLV 1091
            ERG+ IISGGND +VKVWD S++ DA + S +N +L  NI+LSKKVNWLCTTP+DSENLV
Sbjct: 282  ERGKSIISGGNDKTVKVWDCSRYLDAGQPSSSNDVLHLNINLSKKVNWLCTTPADSENLV 341

Query: 1092 VC 1097
            VC
Sbjct: 342  VC 343


>ref|XP_002522238.1| wd40 protein, putative [Ricinus communis] gi|223538491|gb|EEF40096.1|
            wd40 protein, putative [Ricinus communis]
          Length = 1458

 Score =  491 bits (1263), Expect = e-136
 Identities = 232/362 (64%), Positives = 289/362 (79%), Gaps = 1/362 (0%)
 Frame = +3

Query: 15   MMKPRRLKGHKKTVSCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLEKKPISSI 194
            M +PRRL+GHK T +CCIASR RPG++AT+ EDG +CWFDMRCKD    M++  +PISS+
Sbjct: 1    MSEPRRLRGHKATATCCIASRDRPGVVATAGEDGRVCWFDMRCKDAQLMMEVGDQPISSL 60

Query: 195  CFNQGNEDILYACSGTEVISFDVNMASSWKPLETYNYNKEEINQISCNSKSSFLAAADDS 374
            CF  GNE+I Y  SG+EV  FD++MA+S K L++YN+NKEEINQI+CNSK++FLA+ DD 
Sbjct: 61   CFKPGNENIFYVSSGSEVKCFDMHMATSGKLLQSYNHNKEEINQIACNSKAAFLASTDDG 120

Query: 375  GGIKIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKI 554
            G +KIIDIRQHCL+KTLR+GHTSICSSVQF+PWRPW VITGGLD+KLVMWDFSKGRP KI
Sbjct: 121  GNVKIIDIRQHCLFKTLRAGHTSICSSVQFIPWRPWGVITGGLDSKLVMWDFSKGRPTKI 180

Query: 555  MDFGLPDLESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIA 734
            +DFGLP+++   +  QC NPAF+HA+A+P+ DMLDKSGK+C VARGDG+VDVI+IESE+A
Sbjct: 181  VDFGLPEMKDSNT-TQCVNPAFVHAIAVPDADMLDKSGKICVVARGDGIVDVINIESELA 239

Query: 735  SSKLKSSIRPRTGSQSSSGNVKPAASTTTLVQESGKRLHLDNSLGGHTAAVSCVSFSLFA 914
            + + K + + R GSQS+S +    A T          LH D SLGGH AA SCV+FSLF 
Sbjct: 240  AVRTKITTKARKGSQSTSKDSNTTAGT------QSSMLHFDYSLGGHVAAASCVAFSLFG 293

Query: 915  ERGRYIISGGNDASVKVWDWSKHRD-AVETSRTNLLVQNISLSKKVNWLCTTPSDSENLV 1091
            ERG++IISGGND SVKVWD S++ D     S  ++L  NI++SKKVNWLCTTPS+SENLV
Sbjct: 294  ERGKFIISGGNDKSVKVWDCSRYPDVGPSNSNNDILHLNINMSKKVNWLCTTPSESENLV 353

Query: 1092 VC 1097
            VC
Sbjct: 354  VC 355


>ref|XP_004161207.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1390

 Score =  486 bits (1250), Expect = e-135
 Identities = 227/360 (63%), Positives = 286/360 (79%), Gaps = 2/360 (0%)
 Frame = +3

Query: 24   PRRLKGHKKTVSCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLEKKPISSICFN 203
            PRRL+GHK T +CC+AS  RPGL+ATS EDGC+CWFDMRCKDVV  M++ K+PISSICF 
Sbjct: 6    PRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPISSICFK 65

Query: 204  QGNEDILYACSGTEVISFDVNMASSWKPLETYNYNKEEINQISCNSKSSFLAAADDSGGI 383
             GNED++Y  SG E+ SFDV+ A++ KPL +Y+YNKEEINQ+SC+ K+SFLAAADD G +
Sbjct: 66   PGNEDVIYISSGKEIKSFDVHQAAASKPLGSYSYNKEEINQVSCSPKASFLAAADDGGDV 125

Query: 384  KIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKIMDF 563
            KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP + +DF
Sbjct: 126  KIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQALDF 185

Query: 564  GLPDLESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIASSK 743
             +PD     S GQCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE    K
Sbjct: 186  DIPDNHPSSSTGQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE----K 241

Query: 744  LKSSIRPRTGSQSSSGNVKPAASTTTLVQESGKRLHLDNSLGGHTAAVSCVSFSLFAERG 923
             K+S +     Q+ S  V  A       Q   K+L+LD ++GGH+AAVSCV+FS F E+G
Sbjct: 242  SKTSSKTGKKVQTRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEKG 301

Query: 924  RYIISGGNDASVKVWDWSKHRDAVETSRTN--LLVQNISLSKKVNWLCTTPSDSENLVVC 1097
            ++I+SGGND  +K+W+W +  DA +TS +N  +L  NI+LSKKVNWLCTTPS++ENL+VC
Sbjct: 302  KFIVSGGNDKCIKLWNWCEVPDAGKTSSSNNEVLHLNINLSKKVNWLCTTPSETENLIVC 361


>ref|XP_004150226.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic
            subunit 8 [UDP-forming]-like [Cucumis sativus]
          Length = 1362

 Score =  485 bits (1249), Expect = e-134
 Identities = 227/360 (63%), Positives = 286/360 (79%), Gaps = 2/360 (0%)
 Frame = +3

Query: 24   PRRLKGHKKTVSCCIASRTRPGLIATSSEDGCICWFDMRCKDVVFTMDLEKKPISSICFN 203
            PRRL+GHK T +CC+AS  RPGL+ATS EDGC+CWFDMRCKDVV  M++ K+PISSICF 
Sbjct: 6    PRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPISSICFK 65

Query: 204  QGNEDILYACSGTEVISFDVNMASSWKPLETYNYNKEEINQISCNSKSSFLAAADDSGGI 383
             GNED++Y  SG E+ SFDV+ A++ KPL +Y+YNKEEINQ+SC+ K+SFLAAADD G +
Sbjct: 66   PGNEDVIYISSGKEIKSFDVHQATASKPLGSYSYNKEEINQVSCSPKASFLAAADDGGDV 125

Query: 384  KIIDIRQHCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDAKLVMWDFSKGRPCKIMDF 563
            KIID+  +CLYKTLRSGHTSICSSVQFLPWRPWEVITGGLD+KL+MWDFS+GRP +++DF
Sbjct: 126  KIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPIQVLDF 185

Query: 564  GLPDLESHGSGGQCFNPAFIHAVAIPEVDMLDKSGKVCAVARGDGVVDVIDIESEIASSK 743
             +PD     S  QCFNPAFIHA+A+PEV+MLD+ G++C VARGDG+V VIDIESE    K
Sbjct: 186  DIPDNHPSSSTEQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE----K 241

Query: 744  LKSSIRPRTGSQSSSGNVKPAASTTTLVQESGKRLHLDNSLGGHTAAVSCVSFSLFAERG 923
             K+S +     QS S  V  A       Q   K+L+LD ++GGH+AAVSCV+FS F E+G
Sbjct: 242  SKTSSKTGKKVQSRSKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFGEKG 301

Query: 924  RYIISGGNDASVKVWDWSKHRDAVETSRTN--LLVQNISLSKKVNWLCTTPSDSENLVVC 1097
            ++I+SGGND  +K+W+W +  DA +TS +N  +L  NI+LSKKVNWLCTTPS++ENL+VC
Sbjct: 302  KFIVSGGNDKCIKLWNWCEVPDAGKTSSSNNEVLHLNINLSKKVNWLCTTPSETENLIVC 361


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