BLASTX nr result

ID: Coptis21_contig00019539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019539
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    55   6e-06

>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = -1

Query: 267 CSLCGISSEHSKHLFFDCHYSKQVWATVKNNLGLGELVKDSTSEWYSIFRL--CRRNSTC 94
           C LCG   E   HLFF C +S ++W+++   LG    ++ +  +W  + +   C+ NS+ 
Sbjct: 43  CVLCGNVDETRDHLFFVCEFSYEIWSSLLCWLG----IQRTAGDWQGVLQSAHCQSNSSA 98

Query: 93  VDIFKAFVGATVQELWCERNRRKKKNILM 7
             IF+  +   V  +W ERN RK + + M
Sbjct: 99  SCIFRMCISIAVYFIWRERNARKFQQVKM 127


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