BLASTX nr result

ID: Coptis21_contig00019529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019529
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY99068.1| translation initiation factor, partial [Clermonti...   159   2e-37
gb|AFY99065.1| translation initiation factor, partial [Lobelia e...   158   4e-37
gb|AFY99066.1| translation initiation factor, partial [Campanula...   157   9e-37
ref|XP_003522265.1| PREDICTED: eukaryotic initiation factor 4A-1...   157   9e-37
emb|CBI35913.3| unnamed protein product [Vitis vinifera]              157   9e-37

>gb|AFY99068.1| translation initiation factor, partial [Clermontia fauriei]
          Length = 106

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +3

Query: 3   CKGLDVIQQAQSGTGKTATFCSGILQQLDYCSVYCQALVLAPTRELAQQIERVMRALGDY 182
           CKGLDVIQQAQSGTGKTATFCSGILQQLDY  V+CQALVLAPTRELAQQIE+VMRALGDY
Sbjct: 16  CKGLDVIQQAQSGTGKTATFCSGILQQLDYKEVHCQALVLAPTRELAQQIEKVMRALGDY 75

Query: 183 LEVRVHFCVGGTSVREDQRILSDGVHV 263
           L V+VH CVGGTSVREDQRILS GVHV
Sbjct: 76  LGVKVHACVGGTSVREDQRILSSGVHV 102


>gb|AFY99065.1| translation initiation factor, partial [Lobelia erinus]
          Length = 116

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +3

Query: 3   CKGLDVIQQAQSGTGKTATFCSGILQQLDYCSVYCQALVLAPTRELAQQIERVMRALGDY 182
           CKGLDVIQQAQSGTGKTATFCSGILQQLDY +V CQALVLAPTRELAQQIE+VMRALGDY
Sbjct: 15  CKGLDVIQQAQSGTGKTATFCSGILQQLDYGNVQCQALVLAPTRELAQQIEKVMRALGDY 74

Query: 183 LEVRVHFCVGGTSVREDQRILSDGVHV 263
           L V+VH CVGGTSVREDQRILS GVHV
Sbjct: 75  LGVKVHACVGGTSVREDQRILSSGVHV 101


>gb|AFY99066.1| translation initiation factor, partial [Campanula persicifolia]
          Length = 117

 Score =  157 bits (397), Expect = 9e-37
 Identities = 79/87 (90%), Positives = 81/87 (93%)
 Frame = +3

Query: 3   CKGLDVIQQAQSGTGKTATFCSGILQQLDYCSVYCQALVLAPTRELAQQIERVMRALGDY 182
           CKGLDVIQQAQSGTGKTATFCSGILQQLDY  V CQALVLAPTRELAQQIE+VMRALGDY
Sbjct: 16  CKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDY 75

Query: 183 LEVRVHFCVGGTSVREDQRILSDGVHV 263
           L V+VH CVGGTSVREDQRILS GVHV
Sbjct: 76  LGVKVHACVGGTSVREDQRILSSGVHV 102


>ref|XP_003522265.1| PREDICTED: eukaryotic initiation factor 4A-11-like [Glycine max]
          Length = 413

 Score =  157 bits (397), Expect = 9e-37
 Identities = 78/87 (89%), Positives = 81/87 (93%)
 Frame = +3

Query: 3   CKGLDVIQQAQSGTGKTATFCSGILQQLDYCSVYCQALVLAPTRELAQQIERVMRALGDY 182
           CKGLDVIQQAQSGTGKTATFCSG+LQQLDY  V CQALVLAPTRELAQQIE+VMRALGDY
Sbjct: 75  CKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDY 134

Query: 183 LEVRVHFCVGGTSVREDQRILSDGVHV 263
           L V+VH CVGGTSVREDQRILS GVHV
Sbjct: 135 LGVKVHACVGGTSVREDQRILSSGVHV 161


>emb|CBI35913.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  157 bits (397), Expect = 9e-37
 Identities = 79/87 (90%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   CKGLDVIQQAQSGTGKTATFCSGILQQLDYCSVYCQALVLAPTRELAQQIERVMRALGDY 182
           CKGLDVIQQAQSGTGKTATFCSGILQQLDY  V CQALVLAPTRELAQQIE+VMRALGDY
Sbjct: 75  CKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVQCQALVLAPTRELAQQIEKVMRALGDY 134

Query: 183 LEVRVHFCVGGTSVREDQRILSDGVHV 263
           L VRVH CVGGTSVREDQRIL  GVHV
Sbjct: 135 LGVRVHACVGGTSVREDQRILQTGVHV 161


Top