BLASTX nr result

ID: Coptis21_contig00019528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019528
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    50   1e-08

>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
 Frame = +1

Query: 133 SASSDQMENPKKESFEMSGLLSKLPNPIFIDILLRLPIKSLYRCLFLSKAWYHTIKHPSF 312
           S   +   NP  ESFE      KLP  I+ DIL R PI SL  C  +S+ WY ++++P  
Sbjct: 5   SGKEETSRNPGSESFE------KLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLL 58

Query: 313 IEMYHDNKVINNNNTTPCF---------LIQVEVGRDFRLIDNESLDTFETPYNFLSSK 462
             M H N+    N     F         L+QVE        +   L T +TP+  + S+
Sbjct: 59  ANM-HLNRAAEQNLCLLFFSDWPRSKLELVQVEHP------EPRKLKTLKTPFESVLSE 110



 Score = 35.0 bits (79), Expect(2) = 1e-08
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = +2

Query: 491 SCNGLVFSTRRGFLYD---KEPYIICNPITGDHIVLPK---PPLHWIDRIVFGFGFDP 646
           SCNGL+       LYD    +P  I NP T +   LP+    P   I R+VFGFGF P
Sbjct: 116 SCNGLIC------LYDYFSDDPLYIYNPFTIECRELPRVEASPHSVICRVVFGFGFHP 167


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