BLASTX nr result
ID: Coptis21_contig00019228
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00019228 (1326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera] 234 4e-59 ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arab... 225 2e-56 gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana] 220 6e-55 ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara... 220 6e-55 gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana] 220 6e-55 >emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera] Length = 872 Score = 234 bits (597), Expect = 4e-59 Identities = 122/223 (54%), Positives = 170/223 (76%), Gaps = 15/223 (6%) Frame = -3 Query: 1069 SVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMD-DVSSAVNSVIACLLEGSNLPYSKLV 893 +V D+++RI L+ E++GLF+YF+EV + V ++ ++N+V+A LLE S LP SKLV Sbjct: 39 TVEDRKARIGALRAEMEGLFRYFEEVMGEKVDLEVGQCGSMNAVVAVLLEESRLPLSKLV 98 Query: 892 DKIYDKVQSRD---GVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWETRDM 722 +IY+KV+ RD GVTLA+V+S+ +LVGQR YGV NADADVLED + CLWCWETRD+ Sbjct: 99 SEIYEKVKVRDNGGGVTLATVKSSAVLVGQRLAYGVPNADADVLEDETASCLWCWETRDI 158 Query: 721 KLIPTAQRGPLNVRRTCRKKIQDRISAV-----------SAMIAALQVLDSHEDHKYDVM 575 KL+P + RG L +RRTCRKK+ +RISAV SAMI AL+ +S +++KYD++ Sbjct: 159 KLMPKSVRGLLKIRRTCRKKVHERISAVSAASYQHLHLISAMINALEKPESDQNYKYDLI 218 Query: 574 KASEKLGKVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446 KASEKL KVLNEA+IRLL+E+++QK G++MA+K+ K +EK+LI Sbjct: 219 KASEKLAKVLNEADIRLLIESMVQKDGADMAEKDVKREEKILI 261 >ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata] gi|297334251|gb|EFH64669.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata] Length = 814 Score = 225 bits (573), Expect = 2e-56 Identities = 114/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%) Frame = -3 Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911 +L+ +KE++I L E+ GLF YF+EV DQ+ D S S+VNS++A L+E +L Sbjct: 34 NLTSEEKEAQISSLNLEMKGLFAYFREVMDQSKRTDLFSRFSECSSVNSMVALLMEEMSL 93 Query: 910 PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734 P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR YGV NADADVLED +E CLWCWE Sbjct: 94 PLSKLVDEIYLKLKEKIESVTIVAVKSAVVSVGQRVSYGVLNADADVLEDDTESCLWCWE 153 Query: 733 TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554 TRD+K++P + RG L +RRTCRKKI +RI+AVSAM+AA+Q ++ + + D+ KASEKLG Sbjct: 154 TRDLKMLPNSIRGVLKIRRTCRKKIHERITAVSAMLAAVQREETEKSWRSDLSKASEKLG 213 Query: 553 KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446 K+LNE +IR ++N++QK+ +EMA+K++K +EK+L+ Sbjct: 214 KILNEVDIRSFMDNMMQKNSTEMAEKDSKREEKLLL 249 >gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana] Length = 406 Score = 220 bits (561), Expect = 6e-55 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%) Frame = -3 Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911 +L+ +KES+I L E+ GLF YF+EV D++ D S S++NS++A L+E +L Sbjct: 34 NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93 Query: 910 PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734 P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR YGV N DADVLED SE CLWCWE Sbjct: 94 PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153 Query: 733 TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554 TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ ++ + + D+ KA+EKLG Sbjct: 154 TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213 Query: 553 KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446 K+L+E +IR ++N++QK+ SEMA+K++K +EK+L+ Sbjct: 214 KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249 >ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana] gi|332196259|gb|AEE34380.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana] Length = 807 Score = 220 bits (561), Expect = 6e-55 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%) Frame = -3 Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911 +L+ +KES+I L E+ GLF YF+EV D++ D S S++NS++A L+E +L Sbjct: 34 NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93 Query: 910 PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734 P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR YGV N DADVLED SE CLWCWE Sbjct: 94 PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153 Query: 733 TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554 TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ ++ + + D+ KA+EKLG Sbjct: 154 TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213 Query: 553 KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446 K+L+E +IR ++N++QK+ SEMA+K++K +EK+L+ Sbjct: 214 KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249 >gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana] Length = 763 Score = 220 bits (561), Expect = 6e-55 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%) Frame = -3 Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911 +L+ +KES+I L E+ GLF YF+EV D++ D S S++NS++A L+E +L Sbjct: 34 NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93 Query: 910 PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734 P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR YGV N DADVLED SE CLWCWE Sbjct: 94 PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153 Query: 733 TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554 TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ ++ + + D+ KA+EKLG Sbjct: 154 TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213 Query: 553 KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446 K+L+E +IR ++N++QK+ SEMA+K++K +EK+L+ Sbjct: 214 KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249