BLASTX nr result

ID: Coptis21_contig00019228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019228
         (1326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]   234   4e-59
ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arab...   225   2e-56
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]            220   6e-55
ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara...   220   6e-55
gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]     220   6e-55

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score =  234 bits (597), Expect = 4e-59
 Identities = 122/223 (54%), Positives = 170/223 (76%), Gaps = 15/223 (6%)
 Frame = -3

Query: 1069 SVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMD-DVSSAVNSVIACLLEGSNLPYSKLV 893
            +V D+++RI  L+ E++GLF+YF+EV  + V ++     ++N+V+A LLE S LP SKLV
Sbjct: 39   TVEDRKARIGALRAEMEGLFRYFEEVMGEKVDLEVGQCGSMNAVVAVLLEESRLPLSKLV 98

Query: 892  DKIYDKVQSRD---GVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWETRDM 722
             +IY+KV+ RD   GVTLA+V+S+ +LVGQR  YGV NADADVLED +  CLWCWETRD+
Sbjct: 99   SEIYEKVKVRDNGGGVTLATVKSSAVLVGQRLAYGVPNADADVLEDETASCLWCWETRDI 158

Query: 721  KLIPTAQRGPLNVRRTCRKKIQDRISAV-----------SAMIAALQVLDSHEDHKYDVM 575
            KL+P + RG L +RRTCRKK+ +RISAV           SAMI AL+  +S +++KYD++
Sbjct: 159  KLMPKSVRGLLKIRRTCRKKVHERISAVSAASYQHLHLISAMINALEKPESDQNYKYDLI 218

Query: 574  KASEKLGKVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446
            KASEKL KVLNEA+IRLL+E+++QK G++MA+K+ K +EK+LI
Sbjct: 219  KASEKLAKVLNEADIRLLIESMVQKDGADMAEKDVKREEKILI 261


>ref|XP_002888410.1| hypothetical protein ARALYDRAFT_894101 [Arabidopsis lyrata subsp.
            lyrata] gi|297334251|gb|EFH64669.1| hypothetical protein
            ARALYDRAFT_894101 [Arabidopsis lyrata subsp. lyrata]
          Length = 814

 Score =  225 bits (573), Expect = 2e-56
 Identities = 114/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911
            +L+  +KE++I  L  E+ GLF YF+EV DQ+   D  S     S+VNS++A L+E  +L
Sbjct: 34   NLTSEEKEAQISSLNLEMKGLFAYFREVMDQSKRTDLFSRFSECSSVNSMVALLMEEMSL 93

Query: 910  PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YGV NADADVLED +E CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKIESVTIVAVKSAVVSVGQRVSYGVLNADADVLEDDTESCLWCWE 153

Query: 733  TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554
            TRD+K++P + RG L +RRTCRKKI +RI+AVSAM+AA+Q  ++ +  + D+ KASEKLG
Sbjct: 154  TRDLKMLPNSIRGVLKIRRTCRKKIHERITAVSAMLAAVQREETEKSWRSDLSKASEKLG 213

Query: 553  KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446
            K+LNE +IR  ++N++QK+ +EMA+K++K +EK+L+
Sbjct: 214  KILNEVDIRSFMDNMMQKNSTEMAEKDSKREEKLLL 249


>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
          Length = 406

 Score =  220 bits (561), Expect = 6e-55
 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911
            +L+  +KES+I  L  E+ GLF YF+EV D++   D  S     S++NS++A L+E  +L
Sbjct: 34   NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93

Query: 910  PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YGV N DADVLED SE CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153

Query: 733  TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554
            TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ  ++ +  + D+ KA+EKLG
Sbjct: 154  TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213

Query: 553  KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446
            K+L+E +IR  ++N++QK+ SEMA+K++K +EK+L+
Sbjct: 214  KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249


>ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
            gi|332196259|gb|AEE34380.1| chromatin assembly factor-1
            (FASCIATA1) [Arabidopsis thaliana]
          Length = 807

 Score =  220 bits (561), Expect = 6e-55
 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911
            +L+  +KES+I  L  E+ GLF YF+EV D++   D  S     S++NS++A L+E  +L
Sbjct: 34   NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93

Query: 910  PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YGV N DADVLED SE CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153

Query: 733  TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554
            TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ  ++ +  + D+ KA+EKLG
Sbjct: 154  TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213

Query: 553  KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446
            K+L+E +IR  ++N++QK+ SEMA+K++K +EK+L+
Sbjct: 214  KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249


>gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]
          Length = 763

 Score =  220 bits (561), Expect = 6e-55
 Identities = 113/216 (52%), Positives = 165/216 (76%), Gaps = 6/216 (2%)
 Frame = -3

Query: 1075 SLSVLDKESRIDELKKEIDGLFKYFKEVSDQNVIMDDVS-----SAVNSVIACLLEGSNL 911
            +L+  +KES+I  L  E+ GLF YF+EV D++   D  S     S++NS++A L+E  +L
Sbjct: 34   NLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRTDLFSGFSECSSLNSMVALLMEEMSL 93

Query: 910  PYSKLVDKIYDKVQSR-DGVTLASVRSAVLLVGQRSMYGVANADADVLEDSSEECLWCWE 734
            P SKLVD+IY K++ + + VT+ +V+SAV+ VGQR  YGV N DADVLED SE CLWCWE
Sbjct: 94   PLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQRVSYGVLNVDADVLEDDSESCLWCWE 153

Query: 733  TRDMKLIPTAQRGPLNVRRTCRKKIQDRISAVSAMIAALQVLDSHEDHKYDVMKASEKLG 554
            TRD+K++P++ RG L +RRTCRKKI +RI+AVSAM+AALQ  ++ +  + D+ KA+EKLG
Sbjct: 154  TRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAMLAALQREETEKLWRSDLSKAAEKLG 213

Query: 553  KVLNEAEIRLLVENLLQKSGSEMADKEAKLKEKVLI 446
            K+L+E +IR  ++N++QK+ SEMA+K++K +EK+L+
Sbjct: 214  KILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLL 249


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