BLASTX nr result

ID: Coptis21_contig00019216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019216
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331714.1| polyphenol oxidase [Populus trichocarpa] gi|...    65   1e-08
gb|AAU12256.1| polyphenol oxidase [Populus trichocarpa x Populus...    65   1e-08
gb|AAK29783.1| polyphenol oxidase [Ananas comosus]                     65   2e-08
ref|XP_002331793.1| polyphenol oxidase [Populus trichocarpa] gi|...    65   2e-08
gb|AAO16865.1| polyphenol oxidase [Ananas comosus]                     65   2e-08

>ref|XP_002331714.1| polyphenol oxidase [Populus trichocarpa]
           gi|222874320|gb|EEF11451.1| polyphenol oxidase [Populus
           trichocarpa]
          Length = 581

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = +2

Query: 410 SRPKEVQTTSEN-GVVEVLVVDGIQIPHNGPIRLKVYIAKAPNGVVGSDLGQFAGSLINM 586
           SRPK+ ++ +E     EVLV++GI+   N  I+  V +   P+   G D  +FAGS IN+
Sbjct: 466 SRPKKSRSATEKEDEDEVLVIEGIEYEENQLIKFDVLVNDEPDSPGGPDKSEFAGSFINV 525

Query: 587 PFTGVGVGEQRVEVKGKGILELGISGLIKDIEAQNCDMVAVSLVSTLG--SVVIGGIQI 757
           P         +   K K  + LGI+GL++D+EA+  D + V+LV   G  SV +  ++I
Sbjct: 526 P--------HKHAKKSKTTMVLGITGLLEDLEAEGDDTLVVTLVPRTGGDSVTVANVKI 576


>gb|AAU12256.1| polyphenol oxidase [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = +2

Query: 410 SRPKEVQTTSEN-GVVEVLVVDGIQIPHNGPIRLKVYIAKAPNGVVGSDLGQFAGSLINM 586
           SRPK+ ++ +E     EVLV++GI+   N  I+  V +   P+   G D  +FAGS IN+
Sbjct: 466 SRPKKSRSATEKEDEDEVLVIEGIEYEENQLIKFDVLVNDEPDSPGGPDKSEFAGSFINV 525

Query: 587 PFTGVGVGEQRVEVKGKGILELGISGLIKDIEAQNCDMVAVSLVSTLG--SVVIGGIQI 757
           P         +   K K  + LGI+GL++D+EA+  D + V+LV   G  SV +  ++I
Sbjct: 526 P--------HKHAKKSKTTMVLGITGLLEDLEAEGDDTLVVTLVPRTGGDSVTVANVKI 576


>gb|AAK29783.1| polyphenol oxidase [Ananas comosus]
          Length = 351

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = +2

Query: 410 SRPKEVQTTSENGVVEVLVVDGIQIPHNGPIRLKVYIAKAPNGVVGSDLGQFAGSLINMP 589
           +RPK  ++T E    EVLVV+GI++  +  ++  VYI    N  VG +  +FAGS + +P
Sbjct: 235 ARPKTGRSTGEE---EVLVVEGIELDKDVAVKFDVYINAPDNEGVGPEASEFAGSFVQVP 291

Query: 590 FTGVGVGEQRVEVKGKGILELGISGLIKDIEAQNCDMVAVSLVSTLGS--VVIGGIQI 757
                  +++  +  K  L LGI+ L++DI A++ + V V+LV  +G   V +GG++I
Sbjct: 292 HKHKKGKKEKARI--KTTLRLGITDLLEDIGAEDDESVLVTLVPRIGEGLVKVGGLRI 347


>ref|XP_002331793.1| polyphenol oxidase [Populus trichocarpa]
           gi|222874489|gb|EEF11620.1| polyphenol oxidase [Populus
           trichocarpa]
          Length = 581

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = +2

Query: 410 SRPKEVQTTSEN-GVVEVLVVDGIQIPHNGPIRLKVYIAKAPNGVVGSDLGQFAGSLINM 586
           SRPK+ ++ +E     EVLV++GI+   N  I+  V +   P+   G D+ +FAGS +N+
Sbjct: 466 SRPKKSRSATEKEDEDEVLVIEGIEYEENQLIKFDVLVNDEPDSPGGPDMSEFAGSFVNV 525

Query: 587 PFTGVGVGEQRVEVKGKGILELGISGLIKDIEAQNCDMVAVSLVSTLG--SVVIGGIQI 757
           P         +   K K  + LGI+GL++D+EA+  D + V+ V   G  SV +  ++I
Sbjct: 526 P--------HKHAKKSKTTMVLGITGLLEDLEAEGDDTLVVTFVPRTGGDSVTVANVKI 576


>gb|AAO16865.1| polyphenol oxidase [Ananas comosus]
          Length = 577

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = +2

Query: 410 SRPKEVQTTSENGVVEVLVVDGIQIPHNGPIRLKVYIAKAPNGVVGSDLGQFAGSLINMP 589
           +RPK  ++T E    EVLVV+GI++  +  ++  VYI    N  VG +  +FAGS + +P
Sbjct: 461 ARPKTGRSTGEE---EVLVVEGIELDKDVAVKFDVYINAPDNEGVGPEASEFAGSFVQVP 517

Query: 590 FTGVGVGEQRVEVKGKGILELGISGLIKDIEAQNCDMVAVSLVSTLGS--VVIGGIQI 757
                  +++  +  K  L LGI+ L++DI A++ + V V+LV  +G   V +GG++I
Sbjct: 518 HKHKKGKKEKARI--KTTLRLGITDLLEDIGAEDDESVLVTLVPRIGEGLVKVGGLRI 573


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