BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019115
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30094.3| unnamed protein product [Vitis vinifera]              256   7e-66
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   256   7e-66
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   227   4e-57
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   227   4e-57
ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containi...   221   3e-55

>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  256 bits (654), Expect = 7e-66
 Identities = 125/163 (76%), Positives = 143/163 (87%), Gaps = 1/163 (0%)
 Frame = -1

Query: 1116 FDELVKVESIKLREDHYACLVDLCGRAGRLEEAFDITKRLGSKASACVWGALLAGCSVHG 937
            FDELVK  SI +REDHYACLVDLCGRAGRL+EAF   +RL +K SA VWGALLAGC+VH 
Sbjct: 442  FDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHA 501

Query: 936  NVRLGRLAANRLLQVEPENAGTYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWI 757
            NV++G+ AA +LL+VEPENAGTY+LLSNIYASTGKW+EA+++RLKMKDKGLKKQPGCSWI
Sbjct: 502  NVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 561

Query: 756  EVENRVNVFVVGDKSHSESK-IYSLLRDLHYKMRGVGYVPRED 631
            EV NRV+VFVVGDKSHS+SK IYSLLRDLH KM+  GY P  D
Sbjct: 562  EVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNND 604


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  256 bits (654), Expect = 7e-66
 Identities = 125/163 (76%), Positives = 143/163 (87%), Gaps = 1/163 (0%)
 Frame = -1

Query: 1116 FDELVKVESIKLREDHYACLVDLCGRAGRLEEAFDITKRLGSKASACVWGALLAGCSVHG 937
            FDELVK  SI +REDHYACLVDLCGRAGRL+EAF   +RL +K SA VWGALLAGC+VH 
Sbjct: 463  FDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHA 522

Query: 936  NVRLGRLAANRLLQVEPENAGTYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWI 757
            NV++G+ AA +LL+VEPENAGTY+LLSNIYASTGKW+EA+++RLKMKDKGLKKQPGCSWI
Sbjct: 523  NVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582

Query: 756  EVENRVNVFVVGDKSHSESK-IYSLLRDLHYKMRGVGYVPRED 631
            EV NRV+VFVVGDKSHS+SK IYSLLRDLH KM+  GY P  D
Sbjct: 583  EVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPNND 625


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  227 bits (579), Expect = 4e-57
 Identities = 111/167 (66%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
 Frame = -1

Query: 1116 FDELVKVESIKLREDHYACLVDLCGRAGRLEEAFDITKRLGSKASACVWGALLAGCSVHG 937
            F+ LV+  SIKLREDH+ CLVDL GRAGRL+EAFD  K L  K SA VW ALLAGC+VHG
Sbjct: 477  FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536

Query: 936  NVRLGRLAANRLLQVEPENAGTYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWI 757
            ++ LG+L A +LL+ EPENAGTY++LSNIYASTGKW+EA+ +R+KMKDKGLKKQPGCSWI
Sbjct: 537  HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596

Query: 756  EVENRVNVFVVGDKSHSE-SKIYSLLRDLHYKMRGVGYVPREDNRVE 619
            EV N V+VFVVGD SH E   IY LL DLH KM+ +G+   ED  ++
Sbjct: 597  EVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYEDLTID 643


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  227 bits (579), Expect = 4e-57
 Identities = 111/167 (66%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
 Frame = -1

Query: 1116 FDELVKVESIKLREDHYACLVDLCGRAGRLEEAFDITKRLGSKASACVWGALLAGCSVHG 937
            F+ LV+  SIKLREDH+ CLVDL GRAGRL+EAFD  K L  K SA VW ALLAGC+VHG
Sbjct: 477  FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536

Query: 936  NVRLGRLAANRLLQVEPENAGTYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWI 757
            ++ LG+L A +LL+ EPENAGTY++LSNIYASTGKW+EA+ +R+KMKDKGLKKQPGCSWI
Sbjct: 537  HIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGCSWI 596

Query: 756  EVENRVNVFVVGDKSHSE-SKIYSLLRDLHYKMRGVGYVPREDNRVE 619
            EV N V+VFVVGD SH E   IY LL DLH KM+ +G+   ED  ++
Sbjct: 597  EVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYEDLTID 643


>ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
            mitochondrial-like [Glycine max]
          Length = 581

 Score =  221 bits (563), Expect = 3e-55
 Identities = 105/163 (64%), Positives = 130/163 (79%), Gaps = 1/163 (0%)
 Frame = -1

Query: 1116 FDELVKVESIKLREDHYACLVDLCGRAGRLEEAFDITKRLGSKASACVWGALLAGCSVHG 937
            FDE++K  SI+LREDHYACLVDLCGRAGRL+EA +I + LG +    VWGALLAGC+VHG
Sbjct: 412  FDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHG 471

Query: 936  NVRLGRLAANRLLQVEPENAGTYMLLSNIYASTGKWKEASKLRLKMKDKGLKKQPGCSWI 757
            N  +G+L A ++L++EP+NAGTY LLSN+YAS GKWKEA+ +R++MKD GLKKQPGCSWI
Sbjct: 472  NADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWI 531

Query: 756  EVENRVNVFVVGDKSHSE-SKIYSLLRDLHYKMRGVGYVPRED 631
            EV N V VFVVGDK HS+   +  LL DLH KM+  G +P +D
Sbjct: 532  EVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKAGDMPDDD 574