BLASTX nr result

ID: Coptis21_contig00019109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019109
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...   123   2e-26
gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativ...   123   2e-26
gb|AAP54387.2| hAT family dimerisation domain containing protein...   123   2e-26
ref|NP_001183922.1| uncharacterized protein LOC100502515 [Zea ma...   121   5e-26
gb|ACN25881.1| unknown [Zea mays]                                     121   5e-26

>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
           gi|21671885|gb|AAM74247.1|AC074355_9 Putative
           transposable element [Oryza sativa Japonica Group]
           gi|31430424|gb|AAP52341.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/99 (52%), Positives = 74/99 (74%)
 Frame = -2

Query: 363 MIILHEYPIAMVEHYGFREFCRNIQPMFSYFSRYLVKKEIFRIYEDEKSKTMELMGKTRS 184
           MIILHEYP+++V+H GFR F   +QP+F   +R  ++K+I   YE+EK + +  M   +S
Sbjct: 229 MIILHEYPLSIVDHIGFRRFVSALQPLFKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKS 288

Query: 183 RIVITTNMWTSSNQKRGFMVVTTHFIDDSWTLRSKVVRY 67
           R+ ITT++WTS NQKRG+M +T HFIDDSWTLRS ++R+
Sbjct: 289 RVGITTDLWTSDNQKRGYMAITAHFIDDSWTLRSIIMRF 327


>gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativa Japonica Group]
          Length = 568

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/99 (52%), Positives = 74/99 (74%)
 Frame = -2

Query: 363 MIILHEYPIAMVEHYGFREFCRNIQPMFSYFSRYLVKKEIFRIYEDEKSKTMELMGKTRS 184
           MIILHEYP+++V+H GFR F   +QP+F   +R  ++K+I   YE+EK + +  M   +S
Sbjct: 40  MIILHEYPLSIVDHIGFRRFVSALQPLFKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKS 99

Query: 183 RIVITTNMWTSSNQKRGFMVVTTHFIDDSWTLRSKVVRY 67
           R+ ITT++WTS NQKRG+M +T HFIDDSWTLRS ++R+
Sbjct: 100 RVGITTDLWTSDNQKRGYMAITAHFIDDSWTLRSIIMRF 138


>gb|AAP54387.2| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 756

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/99 (52%), Positives = 74/99 (74%)
 Frame = -2

Query: 363 MIILHEYPIAMVEHYGFREFCRNIQPMFSYFSRYLVKKEIFRIYEDEKSKTMELMGKTRS 184
           MIILHEYP+++V+H GFR F   +QP+F   +R  ++K+I   YE+EK + +  M   +S
Sbjct: 213 MIILHEYPLSIVDHIGFRRFVSALQPLFKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKS 272

Query: 183 RIVITTNMWTSSNQKRGFMVVTTHFIDDSWTLRSKVVRY 67
           R+ ITT++WTS NQKRG+M +T HFIDDSWTLRS ++R+
Sbjct: 273 RVGITTDLWTSDNQKRGYMAITAHFIDDSWTLRSIIMRF 311


>ref|NP_001183922.1| uncharacterized protein LOC100502515 [Zea mays]
           gi|238015462|gb|ACR38766.1| unknown [Zea mays]
          Length = 146

 Score =  121 bits (304), Expect = 5e-26
 Identities = 50/99 (50%), Positives = 75/99 (75%)
 Frame = -2

Query: 363 MIILHEYPIAMVEHYGFREFCRNIQPMFSYFSRYLVKKEIFRIYEDEKSKTMELMGKTRS 184
           MI+LHEYP++MV+H GFR F   +QP+F   +R +++ +I + YE EK K +E M   +S
Sbjct: 1   MIVLHEYPLSMVDHVGFRRFVGALQPLFKIGTRNMIRSDIMKHYEVEKKKAIEYMAGIQS 60

Query: 183 RIVITTNMWTSSNQKRGFMVVTTHFIDDSWTLRSKVVRY 67
           R+ +TT++WTS NQKRG+M +T HFID+SWTLR+ ++R+
Sbjct: 61  RVAVTTDLWTSDNQKRGYMAITAHFIDESWTLRNIIMRF 99


>gb|ACN25881.1| unknown [Zea mays]
          Length = 150

 Score =  121 bits (304), Expect = 5e-26
 Identities = 50/99 (50%), Positives = 75/99 (75%)
 Frame = -2

Query: 363 MIILHEYPIAMVEHYGFREFCRNIQPMFSYFSRYLVKKEIFRIYEDEKSKTMELMGKTRS 184
           MI+LHEYP++MV+H GFR F   +QP+F   +R +++ +I + YE EK K +E M   +S
Sbjct: 1   MIVLHEYPLSMVDHVGFRRFVGALQPLFKIGTRNMIRSDIMKHYEVEKKKAIEYMAGIQS 60

Query: 183 RIVITTNMWTSSNQKRGFMVVTTHFIDDSWTLRSKVVRY 67
           R+ +TT++WTS NQKRG+M +T HFID+SWTLR+ ++R+
Sbjct: 61  RVAVTTDLWTSDNQKRGYMAITAHFIDESWTLRNIIMRF 99


Top