BLASTX nr result

ID: Coptis21_contig00019051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019051
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic reco...    65   4e-09
emb|CBI26317.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002314664.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
emb|CAN71783.1| hypothetical protein VITISV_028799 [Vitis vinifera]    65   4e-09
ref|XP_002517062.1| meiotic recombination protein dmc1, putative...    64   2e-08

>ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
           homolog [Vitis vinifera]
          Length = 361

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/56 (60%), Positives = 37/56 (66%)
 Frame = +1

Query: 112 MKSEDASHMQLXXXXXXXXXXXXXXXXXKLISQGINAGDVKKLQDAGIYTCNGLMM 279
           +KSE+ S +QL                 KLISQGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 5   LKSEEHSQLQLVEREDIEDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMM 60


>emb|CBI26317.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/56 (60%), Positives = 37/56 (66%)
 Frame = +1

Query: 112 MKSEDASHMQLXXXXXXXXXXXXXXXXXKLISQGINAGDVKKLQDAGIYTCNGLMM 279
           +KSE+ S +QL                 KLISQGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 5   LKSEEHSQLQLVEREDIEDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMM 60


>ref|XP_002314664.1| predicted protein [Populus trichocarpa] gi|222863704|gb|EEF00835.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = +1

Query: 103 MIDMKSEDASHMQLXXXXXXXXXXXXXXXXXKLISQGINAGDVKKLQDAGIYTCNGLMM 279
           M+  ++E+ +H+QL                 KLI+QGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 1   MVVFRAEEQNHLQLMEREEMDGEDDLFEAIEKLINQGINAGDVKKLQDAGIYTCNGLMM 59


>emb|CAN71783.1| hypothetical protein VITISV_028799 [Vitis vinifera]
          Length = 348

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/56 (60%), Positives = 37/56 (66%)
 Frame = +1

Query: 112 MKSEDASHMQLXXXXXXXXXXXXXXXXXKLISQGINAGDVKKLQDAGIYTCNGLMM 279
           +KSE+ S +QL                 KLISQGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 5   LKSEEHSQLQLVEREDIEDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMM 60


>ref|XP_002517062.1| meiotic recombination protein dmc1, putative [Ricinus communis]
           gi|223543697|gb|EEF45225.1| meiotic recombination
           protein dmc1, putative [Ricinus communis]
          Length = 353

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/56 (57%), Positives = 37/56 (66%)
 Frame = +1

Query: 112 MKSEDASHMQLXXXXXXXXXXXXXXXXXKLISQGINAGDVKKLQDAGIYTCNGLMM 279
           +K+E+ S +QL                 KLI+QGINAGDVKKLQDAGIYTCNGLMM
Sbjct: 5   LKAEEQSQLQLVEREDIDDEEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLMM 60


Top