BLASTX nr result

ID: Coptis21_contig00019023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019023
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL30110.1| resistance gene analog [Solanum phureja x Solanum...    79   5e-13
emb|CAC79995.1| kinase [Solanum pinnatisectum] gi|56565145|emb|C...    78   6e-13
emb|CAC79997.1| kinase [Solanum pinnatisectum]                         78   6e-13
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...    78   8e-13
gb|AAL30111.1| resistance gene analog [Solanum phureja x Solanum...    77   2e-12

>gb|AAL30110.1| resistance gene analog [Solanum phureja x Solanum stenotomum]
          Length = 170

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 GSRIIITTRDENIAKKMVSTYIHRLGQLSDEECWSFFKHIALRERQDK-REKFAEIGKKI 28
           GSRI++T+R E +   M S+Y+HRLGQLSD +CW+ F  IA   R ++ RE   +IG++I
Sbjct: 100 GSRILVTSRSERVVGIMDSSYMHRLGQLSDSDCWALFSRIAFSGRSNEDRENLEDIGRRI 159

Query: 27  VLKCKGVPL 1
           V KCKG+PL
Sbjct: 160 VRKCKGLPL 168


>emb|CAC79995.1| kinase [Solanum pinnatisectum] gi|56565145|emb|CAC79996.1| kinase
           [Solanum pinnatisectum]
          Length = 174

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 GSRIIITTRDENIAKKMVSTYIHRLGQLSDEECWSFFKHIALRER-QDKREKFAEIGKKI 28
           GSRI++T+R E +   M S+Y+HRLGQ+SD +CW+ F  IA   R  + RE   +IG++I
Sbjct: 103 GSRILVTSRSERVVGMMGSSYMHRLGQISDSDCWALFSRIAFSGRTNEDRENLEDIGRRI 162

Query: 27  VLKCKGVPL 1
           V KCKG+PL
Sbjct: 163 VRKCKGLPL 171


>emb|CAC79997.1| kinase [Solanum pinnatisectum]
          Length = 174

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 GSRIIITTRDENIAKKMVSTYIHRLGQLSDEECWSFFKHIALRER-QDKREKFAEIGKKI 28
           GSRI++T+R E +   M S+Y+HRLGQ+SD +CW+ F  IA   R  + RE   +IG++I
Sbjct: 103 GSRILVTSRSERVVGMMGSSYMHRLGQISDSDCWALFSRIAFSGRTNEDRENLEDIGRRI 162

Query: 27  VLKCKGVPL 1
           V KCKG+PL
Sbjct: 163 VRKCKGLPL 171


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 GSRIIITTRDENIAKKMVSTYIHRLGQLSDEECWSFFKHIALRER-QDKREKFAEIGKKI 28
           GSRI++TTR + +AK M S Y   LG+L+DEECWS F  +A   R QD  E F EIG++I
Sbjct: 332 GSRILVTTRKDTVAKMMESDYSLLLGKLTDEECWSVFSQVAFYGRSQDACEMFTEIGRQI 391

Query: 27  VLKCKGVPL 1
           V +CKG+PL
Sbjct: 392 VYRCKGLPL 400


>gb|AAL30111.1| resistance gene analog [Solanum phureja x Solanum stenotomum]
          Length = 171

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 GSRIIITTRDENIAKKMVSTYIHRLGQLSDEECWSFFKHIALRERQDK-REKFAEIGKKI 28
           GSRI++T+R E +   M S+Y+HRL Q+SD +CW+ F  IA   R ++ RE   +IG+KI
Sbjct: 101 GSRILVTSRSERVVGMMGSSYMHRLRQISDSDCWALFSRIAFSGRSNEDRENLEDIGRKI 160

Query: 27  VLKCKGVPL 1
           V KCKG+PL
Sbjct: 161 VRKCKGLPL 169


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