BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018987
         (1896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               79   3e-12
ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    75   5e-11
ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...    75   8e-11
ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatul...    73   3e-10
ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatul...    71   1e-09

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 26/251 (10%)
 Frame = +1

Query: 319 QSEDIISNLNEDVILYVLSFLDIKAAVVTXXXXXXXXXXXXXXXVLNFDQRFYPWFKKYP 498
           +S DIISNL ++++ ++LSFL  K AV T               +L+FD     W     
Sbjct: 7   ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDEL--WLNPST 64

Query: 499 FKNSLDKVI-------NVLRNVQEIHLK-------------LSSELPQCIFNWKSLRVLK 618
                +++I        VLR+ +   +K                ELP   F  K+L V+K
Sbjct: 65  LVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDNWGVELPPMFFICKTLVVVK 124

Query: 619 LKGVDGFLWLRNPHSVDLPLLKSLHLTRV-VLDMTLVNDCLSKCPALEVLSLKCCEFMHL 795
           L      L+L  P +V LP LK+LHL  V   D   +   LS CP LE L ++  E  + 
Sbjct: 125 LSCA---LFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQ 181

Query: 796 EDLIVSSPQLKKLVIITYDQNYGC-----FKHYDTKIWAPKLTFLKVRDYISKRFSLDNL 960
             + VS+P LK L I  +   +        + Y   + AP L +L + DY+SK + + +L
Sbjct: 182 WVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDL 241

Query: 961 SSLESAVIDLK 993
            SL  A ID++
Sbjct: 242 PSLVKAFIDVE 252


>ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
            [Vitis vinifera]
          Length = 513

 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 106/403 (26%), Positives = 173/403 (42%), Gaps = 50/403 (12%)
 Frame = +1

Query: 529  VLRNVQEIHLKLSSE----LPQCIFNWKSLRVLKLK-GVDGFLWLRNPHSVDL----PLL 681
            +  NVQ++ + + ++    LP+C+   +SL+ L LK    GF   R P S+ +      L
Sbjct: 134  IRHNVQDLDIDVCTDDYFNLPRCVVMSESLKALSLKFRPPGF---RLPPSMVMRGGFQSL 190

Query: 682  KSLHLTRVV-------LDM-------TLVNDCLSKCPALEVLSLKCCEFM--------HL 795
            ++L L+ +V       LD+        L    L  C  ++ L + C             L
Sbjct: 191  QTLSLSHMVFYKKHYLLDLFAGSAFPVLRKLTLDSCRGIKFLDVGCRVLQDLTVENCFQL 250

Query: 796  EDLIVSSPQLKKLVIITYDQNYGCFKHYDTKIW----APKLTFLK-VRDYISKRFSLDNL 960
              L VS P+L++L +++      CF+    K W    AP+L  +    + I++   L+NL
Sbjct: 251  HGLTVSGPRLERLRVVS------CFESSSEKSWVKIIAPRLRVMHWEHNAITETSCLENL 304

Query: 961  SSLESAVIDLKANEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXXMFSSALKIQR 1140
            +S+E A I   A +      T+ E  K V  +L GL              + S+      
Sbjct: 305  ASMEEAFIGFFALDE----DTRAEKYKSVSNILSGLSHAHCLTLQSQCIQILSNNHYSTI 360

Query: 1141 MSSQFSNLRHFMLTS--SPNDACDVLQLLMDSPNIKTLLLKMTWTNFNSYQGRLY----W 1302
                F NL+   L +    N+   +L L   SP + TL+LK+  T+F + + + +    W
Sbjct: 361  SLHPFHNLKTMKLHTVLDKNNIRGLLCLFRSSPTLHTLILKII-THFKAEKTKAWNKALW 419

Query: 1303 DEPSFYSTIMEANWEEWLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIK 1479
            D  S  S+  E  WE   Q F+  L+HL+ V +   +  ENE+ L+  LL+   AL+++ 
Sbjct: 420  DHMS--SSEQEQYWESRSQTFKSFLQHLKVVRMEGLVESENEIGLIKFLLKHGMALQEMI 477

Query: 1480 IVLGQ------VWPHS-REKMMWVVWKILQRVPRASQNIMLEF 1587
            +  G       V  H  R +MM   W        AS N  L F
Sbjct: 478  LCSGHSNSRDPVRRHEIRSQMMGFSW--------ASSNAKLAF 512


>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
            gi|222858320|gb|EEE95867.1| f-box family protein [Populus
            trichocarpa]
          Length = 511

 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 30/345 (8%)
 Frame = +1

Query: 538  NVQEIHLKLSS----ELPQCIFNWKSLRVLKLKG-VDGFLWLRNP-HSVDLPLLKSLHLT 699
            NVQE+ +++++      P+ +   +SLRVLKL+    GF  L +   ++  P L +L L+
Sbjct: 133  NVQELDVEVATGDYFNFPRGVITSESLRVLKLRSRYPGFRLLPSSVMTIGFPSLHTLSLS 192

Query: 700  RVVL-DMTLVNDCL--SKCPALEVLSLKCCEFMH--------LEDLIVSSP-QLKKLVII 843
             V+L + + + D    S  P L+ L+L  C  M         LEDL + +  QL  L I 
Sbjct: 193  LVILYEQSSLLDLFTESSFPCLKNLNLDACFGMKHLKVCCRALEDLTIENCFQLHSLDIC 252

Query: 844  TYDQNY----GCFKHYDTKIW----APKLTFLKVR-DYISKRFSLDNLSSLESAVIDLKA 996
            +          CF  Y  K W    AP+L  +    + I+   SL NL+SL  A +    
Sbjct: 253  SAKLENLRVASCFDAYSDKTWFKVNAPRLRGISWEYNSITASSSLVNLTSLHEASVGFSL 312

Query: 997  NEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXXMFSSALKIQRMSSQFSNLRHFM 1176
                + +    E  + V   L GL              + S+   I  +   F+NL+   
Sbjct: 313  LHENLSV----EKLQSVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPFNNLKVLE 368

Query: 1177 LTSS--PNDACDVLQLLMDSPNIKTLLLKMTWTNFNSYQGRLYWDEPSFYSTIMEANWEE 1350
            L +    N+   +  L   SP + TL+LK+   +F + + +   D     ++  E  WE 
Sbjct: 369  LHTGFEKNNVPGLAFLFRSSPTLHTLILKII-NDFKTERRQWNRDLWDLSTSAEEQYWES 427

Query: 1351 WLQ-FQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATALRKIKI 1482
             LQ  +  L+HL+ V+I  FL CENEV L   LL+    L+++ +
Sbjct: 428  QLQALRPFLDHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTL 472


>ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355517806|gb|AES99429.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 459

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 110/484 (22%), Positives = 185/484 (38%), Gaps = 50/484 (10%)
 Frame = +1

Query: 289  CVTNGRHQLGQSE-------DIISNLNEDVILYVLSFLDIKAAVVTXXXXXXXXXXXXXX 447
            C  +    LG +E       D IS L  +VI Y+LSFL  K A+ T              
Sbjct: 13   CCFSSSSSLGHTERKVERQVDRISRLPNEVIAYILSFLPTKDAITTSVLSHRWISLWTFA 72

Query: 448  XVLNFDQRFYPWFKKYPFKNSLDKVI-------------NVLRNVQEIHL---------- 558
              L+F      +  K  F + ++ V+             ++L N    HL          
Sbjct: 73   DALHFPNHCPSFLTKENFVDIMNSVLSQRESKCIKRLSFSILNNCYIPHLVSSIVSMATT 132

Query: 559  -----------KLSSELPQCIFNWKSLRVLKLKGVDGFLWLRNPHSVDLPLLKSLHLTRV 705
                       +L   LP  ++  K+L VL+L G      L  P  + LPLLK LHL  +
Sbjct: 133  QKVYEIDLSLYRLKVYLPHQLYTCKTLTVLRLVGT---FHLNVPSHLHLPLLKILHLNLL 189

Query: 706  VL----DMTLVNDCLSKCPALEVLSLKCCEFMHLEDLIVSSPQLKKLVIITYDQNYGCFK 873
                  D   +   LS CPALE L  +  +F       +  P LK+L + ++D+      
Sbjct: 190  CFVDDHDDDALMRFLSSCPALEQLFYEEVKFKRTSLFGICVPSLKRLFVRSFDER----- 244

Query: 874  HYDTKIWAPKLTFLKVRDYISKRFSLDNLSSLESAVIDLKANEHFVPLGTKQENAK---R 1044
                 I  P L  L +++  +  + ++NL +L+ A I +    HF       EN K    
Sbjct: 245  ---LHIKTPLLECLVMKETKAINYVVENLDNLKEAHIGI----HF-----DYENKKVKEN 292

Query: 1045 VIQVLEGLCRXXXXXXXXXXXXMFSSALKIQRMSSQFSNLRHFMLTSSPNDACDVLQLLM 1224
            +  +  G+ +            + + A         F +L H  L     D+  +++LL+
Sbjct: 293  IANIFNGVRKTRFLCLDLYTTEVLTYAC---LEFPTFDHLGHLQLYLKILDSYFLVELLL 349

Query: 1225 DS-PNIKTL-LLKMTWTNFNSYQGRLYWDEPSFYSTIMEANWEEWLQFQCLLEHLESVEI 1398
            +  PN++ L ++K+     N  +    W +P+   +             CL  HL +   
Sbjct: 350  EKCPNLEFLEIIKVDELCDNEIE----WRQPTIVPS-------------CLSSHLTTFIF 392

Query: 1399 RNFLGCENEVRLLIVLLQKATALRKIKIVLGQVWPHSREKMMWVVWKILQRVPRASQNIM 1578
            R++ G + E  L+  +L     L++  I       +  E    V+   L  +PRAS++  
Sbjct: 393  RDYEGTDEEFELISYILNSGKVLKRTTIYFESSCWNPSETSDAVL--ELSSLPRASKDNR 450

Query: 1579 LEFV 1590
              +V
Sbjct: 451  TNYV 454


>ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355518104|gb|AES99727.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 436

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 103/438 (23%), Positives = 176/438 (40%), Gaps = 35/438 (7%)
 Frame = +1

Query: 310  QLGQSEDIISNLNEDVILYVLSFLDIKAAVVTXXXXXXXXXXXXXXXVLNFD-------- 465
            +L +  D IS+L+ +V+  +LSFL  K A+ T                L+F         
Sbjct: 7    ELEEQVDRISSLHNEVLANILSFLPTKEAIATSVLSRRWVSLWTLTNSLHFPENCPTRNN 66

Query: 466  ----------QRFYPWFKKYPFKNSLDKVINVL----------RNVQEIHLKLSS---EL 576
                      QR     K+  F    +  I  L          + V+EI L L S    L
Sbjct: 67   FVQIVKSVLAQRKPSCMKRVSFSIHNNCYIPHLVSSIVCMASKQKVEEIDLSLYSLKVYL 126

Query: 577  PQCIFNWKSLRVLKLKGVDGFLWLRNPHSVDLPLLKSLHL--TRVVLDMTLVNDCLSKCP 750
            P  IF  ++L VLKL G     +L  P  + LPLLK LHL  + +V D  L+      CP
Sbjct: 127  PCEIFACETLVVLKLVGR---FYLNLPSHLHLPLLKILHLCISCIVEDKALMK-LFYGCP 182

Query: 751  ALEVLSLKCCEFMHLEDLIVSSPQLKKLVIITYDQNYGCFKHYDTKIWAPKLTFLKVRDY 930
             LE L  +  EF       +  P LK+L + ++D+      H +T    P L +L + + 
Sbjct: 183  VLEELYYEDVEFKCSSLFGICVPTLKRLHVRSFDEKI----HINT----PLLEYLVLEET 234

Query: 931  ISKRFSLDNLSSLESAVIDLKANEHFVPLGTKQENAKRVIQVLEGLCRXXXXXXXXXXXX 1110
             +  + ++NL+ L+ A I +  +         +E  + +  +L G+ +            
Sbjct: 235  KASNYEVENLNKLKEARIGIYFDHE------NKEVKQNISNLLNGIHKTRFLCLDMDSTE 288

Query: 1111 MFSSALKIQRMSSQFSNLRHFMLTSSPNDACDVLQLLMDS-PNIKTL-LLKMTWTNFNSY 1284
            + + A         F+NL +  L     ++  +++LL++  PN+  L ++K+     +  
Sbjct: 289  VLTYACL---EFPTFNNLGYLQLYLKTFNSHFLVKLLLEKCPNLDVLEIIKVD----DLC 341

Query: 1285 QGRLYWDEPSFYSTIMEANWEEWLQFQCLLEHLESVEIRNFLGCENEVRLLIVLLQKATA 1464
               + W EP+   +             CL  HL +   R++ G + E  L+  +L+    
Sbjct: 342  DNEIKWAEPTIVPS-------------CLSSHLTTFIFRDYEGTDEEFELIRYILKSGKV 388

Query: 1465 LRKIKIVLGQVWPHSREK 1518
            L +  I  G  W  S  +
Sbjct: 389  LERTTIYFGSSWEPSEAR 406