BLASTX nr result

ID: Coptis21_contig00018986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018986
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...    68   7e-10
ref|XP_003636077.1| Multidrug resistance protein ABC transporter...    68   9e-10
ref|NP_850575.1| ABC transporter C family member 3 [Arabidopsis ...    67   1e-09
dbj|BAF63397.1| multidrug resistance-associated protein [Fagopyr...    67   1e-09
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...    67   2e-09

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/57 (63%), Positives = 44/57 (77%)
 Frame = +3

Query: 111  DQLTQSQNRSGSTSIVTAKGENWSMCQRQLVCLG*VLLKRSKILVLHEATSSVHTAT 281
            D++ + +N+  ST  V   GENWSM QRQLVCLG VLLK+SK+LVL EAT+SV TAT
Sbjct: 1104 DEVRKKENKLDST--VAENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTAT 1158


>ref|XP_003636077.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355502012|gb|AES83215.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1285

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 111  DQLTQSQNRSGSTSIVTAKGENWSMCQRQLVCLG*VLLKRSKILVLHEATSSVHTAT 281
            D++ + + +  ST  VT  GENWSM QRQLVCLG VLLK+SKILVL EAT+SV TAT
Sbjct: 1156 DEVRKKEGKLHST--VTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTAT 1210


>ref|NP_850575.1| ABC transporter C family member 3 [Arabidopsis thaliana]
            gi|332641770|gb|AEE75291.1| ABC transporter C family
            member 3 [Arabidopsis thaliana]
          Length = 1489

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/81 (53%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +3

Query: 45   LTVLLHQSHGRIACQITSPTGLDQLTQSQNRSGST--SIVTAKGENWSMCQRQLVCLG*V 218
            LT+ LH    R+  QI       QL     +      S V+  G+NWSM QRQLVCLG V
Sbjct: 1335 LTIGLHDLRLRLNDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRV 1394

Query: 219  LLKRSKILVLHEATSSVHTAT 281
            LLKRSKILVL EAT+SV TAT
Sbjct: 1395 LLKRSKILVLDEATASVDTAT 1415


>dbj|BAF63397.1| multidrug resistance-associated protein [Fagopyrum esculentum]
          Length = 1278

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +3

Query: 150  SIVTAKGENWSMCQRQLVCLG*VLLKRSKILVLHEATSSVHTAT 281
            S+VT  GENWSM QRQLVCLG VLLK++KILVL EAT+SV TAT
Sbjct: 1161 SLVTENGENWSMGQRQLVCLGRVLLKKTKILVLDEATASVDTAT 1204


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +3

Query: 150  SIVTAKGENWSMCQRQLVCLG*VLLKRSKILVLHEATSSVHTAT 281
            S VT  GENWSM QRQLVCLG VLLK+SK+LVL EAT+SV TAT
Sbjct: 1366 SAVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTAT 1409


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