BLASTX nr result
ID: Coptis21_contig00018969
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018969 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas] 72 5e-11 ref|XP_002300732.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|... 61 1e-07 emb|CBI19787.3| unnamed protein product [Vitis vinifera] 60 1e-07 ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260... 60 1e-07 >dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas] Length = 315 Score = 72.0 bits (175), Expect = 5e-11 Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 6/76 (7%) Frame = +2 Query: 2 KGLLYDQGPE------GESSSGGAQRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYPTP 163 +GLLYDQGP+ GESSSGGAQ+ + +L+DPSSLYP P Sbjct: 240 RGLLYDQGPDSRYTSGGESSSGGAQQLNLITAATTSTEATPSNQQGTGALIDPSSLYPAP 299 Query: 164 LTAFMAGTQFFPHPRS 211 L AF+AGTQFFP PRS Sbjct: 300 LNAFIAGTQFFPPPRS 315 >ref|XP_002300732.1| predicted protein [Populus trichocarpa] gi|222842458|gb|EEE80005.1| predicted protein [Populus trichocarpa] Length = 321 Score = 62.8 bits (151), Expect = 3e-08 Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 10/80 (12%) Frame = +2 Query: 2 KGLLYDQGPEG-------ESSSGGAQR-NLIXXXXXXXXXXXXXXXXXXX--SLLDPSSL 151 +G+LYDQGP+G ESSS GAQ+ LI +L DPSSL Sbjct: 242 RGILYDQGPDGRYTSTGGESSSSGAQQLGLITAATTSTTATTTNTGNPAAGNTLFDPSSL 301 Query: 152 YPTPLTAFMAGTQFFPHPRS 211 YP PL AF+AGTQFFP PRS Sbjct: 302 YPAPLNAFIAGTQFFPPPRS 321 >ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|222836862|gb|EEE75255.1| short internodes 2 [Populus trichocarpa] Length = 344 Score = 60.8 bits (146), Expect = 1e-07 Identities = 40/88 (45%), Positives = 44/88 (50%), Gaps = 18/88 (20%) Frame = +2 Query: 2 KGLLYDQGPE------GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXX-------- 127 KG+LYD+GPE GE+SSGG NLI Sbjct: 257 KGVLYDRGPESNYLAPGETSSGGGGGVQPLNLIAAGTATTSATISATGGGGGVTVASTTA 316 Query: 128 SLLDPSSLYPTPLTAFMAGTQFFPHPRS 211 S LDPSSLYP PL FMAGTQFFP+PRS Sbjct: 317 SFLDPSSLYPAPLNTFMAGTQFFPNPRS 344 >emb|CBI19787.3| unnamed protein product [Vitis vinifera] Length = 289 Score = 60.5 bits (145), Expect = 1e-07 Identities = 40/77 (51%), Positives = 42/77 (54%), Gaps = 8/77 (10%) Frame = +2 Query: 2 KGLLYDQGPE----GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYP 157 KG+LYD GPE GESSSGG Q NLI +LLDPS LYP Sbjct: 218 KGILYDHGPESRYGGESSSGGGSGSQQHNLITAPPGVTTTSNQAT-----TLLDPS-LYP 271 Query: 158 TPLTAFMAGTQFFPHPR 208 PL FMAGTQFFP PR Sbjct: 272 APLNVFMAGTQFFPPPR 288 >ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260953 [Vitis vinifera] Length = 320 Score = 60.5 bits (145), Expect = 1e-07 Identities = 40/77 (51%), Positives = 42/77 (54%), Gaps = 8/77 (10%) Frame = +2 Query: 2 KGLLYDQGPE----GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYP 157 KG+LYD GPE GESSSGG Q NLI +LLDPS LYP Sbjct: 249 KGILYDHGPESRYGGESSSGGGSGSQQHNLITAPPGVTTTSNQAT-----TLLDPS-LYP 302 Query: 158 TPLTAFMAGTQFFPHPR 208 PL FMAGTQFFP PR Sbjct: 303 APLNVFMAGTQFFPPPR 319