BLASTX nr result

ID: Coptis21_contig00018969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018969
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]                          72   5e-11
ref|XP_002300732.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...    61   1e-07
emb|CBI19787.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260...    60   1e-07

>dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]
          Length = 315

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
 Frame = +2

Query: 2   KGLLYDQGPE------GESSSGGAQRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYPTP 163
           +GLLYDQGP+      GESSSGGAQ+  +                   +L+DPSSLYP P
Sbjct: 240 RGLLYDQGPDSRYTSGGESSSGGAQQLNLITAATTSTEATPSNQQGTGALIDPSSLYPAP 299

Query: 164 LTAFMAGTQFFPHPRS 211
           L AF+AGTQFFP PRS
Sbjct: 300 LNAFIAGTQFFPPPRS 315


>ref|XP_002300732.1| predicted protein [Populus trichocarpa] gi|222842458|gb|EEE80005.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
 Frame = +2

Query: 2   KGLLYDQGPEG-------ESSSGGAQR-NLIXXXXXXXXXXXXXXXXXXX--SLLDPSSL 151
           +G+LYDQGP+G       ESSS GAQ+  LI                     +L DPSSL
Sbjct: 242 RGILYDQGPDGRYTSTGGESSSSGAQQLGLITAATTSTTATTTNTGNPAAGNTLFDPSSL 301

Query: 152 YPTPLTAFMAGTQFFPHPRS 211
           YP PL AF+AGTQFFP PRS
Sbjct: 302 YPAPLNAFIAGTQFFPPPRS 321


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/88 (45%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
 Frame = +2

Query: 2   KGLLYDQGPE------GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXX-------- 127
           KG+LYD+GPE      GE+SSGG       NLI                           
Sbjct: 257 KGVLYDRGPESNYLAPGETSSGGGGGVQPLNLIAAGTATTSATISATGGGGGVTVASTTA 316

Query: 128 SLLDPSSLYPTPLTAFMAGTQFFPHPRS 211
           S LDPSSLYP PL  FMAGTQFFP+PRS
Sbjct: 317 SFLDPSSLYPAPLNTFMAGTQFFPNPRS 344


>emb|CBI19787.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/77 (51%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
 Frame = +2

Query: 2   KGLLYDQGPE----GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYP 157
           KG+LYD GPE    GESSSGG     Q NLI                   +LLDPS LYP
Sbjct: 218 KGILYDHGPESRYGGESSSGGGSGSQQHNLITAPPGVTTTSNQAT-----TLLDPS-LYP 271

Query: 158 TPLTAFMAGTQFFPHPR 208
            PL  FMAGTQFFP PR
Sbjct: 272 APLNVFMAGTQFFPPPR 288


>ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260953 [Vitis vinifera]
          Length = 320

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/77 (51%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
 Frame = +2

Query: 2   KGLLYDQGPE----GESSSGGA----QRNLIXXXXXXXXXXXXXXXXXXXSLLDPSSLYP 157
           KG+LYD GPE    GESSSGG     Q NLI                   +LLDPS LYP
Sbjct: 249 KGILYDHGPESRYGGESSSGGGSGSQQHNLITAPPGVTTTSNQAT-----TLLDPS-LYP 302

Query: 158 TPLTAFMAGTQFFPHPR 208
            PL  FMAGTQFFP PR
Sbjct: 303 APLNVFMAGTQFFPPPR 319


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