BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018966
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002510842.1| arginine/serine-rich splicing factor, putati...   103   2e-20
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   100   2e-19
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   100   2e-19
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           100   2e-19

>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  107 bits (267), Expect = 1e-21
 Identities = 77/178 (43%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
 Frame = -3

Query: 536 DATNMSKLMDQVVSVEYAVRDDDGRNNRYSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSP 357
           DATN+SKL+D+V+SVEYAVRDDD R + YSP                 SPSP+RR+R SP
Sbjct: 147 DATNLSKLLDRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSP 206

Query: 356 DYGHG---LGSERGR---DRARSPNPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXXXX 195
           DYG G      ERG     R RSP+P+R DR SPDYGRG S +   R RA          
Sbjct: 207 DYGRGPSPYRKERGSPDYGRRRSPSPYRRDRASPDYGRGTSRSPYRRERA---------- 256

Query: 194 XXXXXXDAKPEMRGR-----TYRRDSPNVVGGLSPDSKPELRGHTYRRDSPDVGRGSS 36
                    PE  GR      YRR+  N   G      P  R     R +PD GRGSS
Sbjct: 257 ----GKRISPE-NGRGPSRSPYRRERSNQGHGRGSSHSPYGR----ERPNPDNGRGSS 305


>ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223549957|gb|EEF51444.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 331

 Score =  103 bits (256), Expect = 2e-20
 Identities = 76/201 (37%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
 Frame = -3

Query: 536 DATNMSKLMDQVVSVEYAVRDDDGRNNRYSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSP 357
           +ATNMSKLMD+V+SVEYAVRDDD R N YSP                 S SP+RR+R SP
Sbjct: 106 EATNMSKLMDRVISVEYAVRDDDERRNGYSPDRGRDRSPDRRSHDRKRSSSPYRRERGSP 165

Query: 356 DYGHGLGSERGR--------DRARSPNPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXX 201
           DYG G      R         R RSP+P++ DR SPDYGR  S +   R R         
Sbjct: 166 DYGRGPSPGPYRRERASPDYGRRRSPSPYKRDRASPDYGRASSRSPYRRERPGSDHGRGS 225

Query: 200 XXXXXXXXDAKPEM-RGRT---YRRDSPNVVGGLSPDSKPELRGHT------------YR 69
                    A P+  RG +   Y+R+  +   G      P  R  T            Y 
Sbjct: 226 SRSPYHRERASPDNGRGHSASPYQREKASPDNGRDRSRSPYGRERTNPDNGRGSSRSPYE 285

Query: 68  RD--SPDVGRGSSPNSEYEGR 12
           +D  SP+ GR +SPNS +E R
Sbjct: 286 KDVNSPENGRRTSPNSMHEER 306


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score =  100 bits (248), Expect = 2e-19
 Identities = 68/172 (39%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = -3

Query: 536 DATNMSKLMDQVVSVEYAVRDDDGRNNRYSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSP 357
           +ATNMSKLMD+V+SVEYAVRDDD R N YSP                 S SP+RR+R SP
Sbjct: 149 EATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSP 208

Query: 356 DYGHGLGSERGRDRARSPNPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXXXXXXXXXX 177
           DYG G           SP+ +R +R SPDYGR PSP+ + R RA                
Sbjct: 209 DYGRG----------SSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHG----------- 247

Query: 176 DAKPEMRGRT---YRRDSPNVVGGLSPDSKPELRGHTYRRDSPDVGRGSSPN 30
                 R R+   +RR+  +      P   P  R     R  PD GRG SP+
Sbjct: 248 ------RSRSPSHHRRERTSHDSARGPSRSP-YRSERSDRAIPDYGRGRSPS 292


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  100 bits (248), Expect = 2e-19
 Identities = 68/172 (39%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = -3

Query: 536 DATNMSKLMDQVVSVEYAVRDDDGRNNRYSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSP 357
           +ATNMSKLMD+V+SVEYAVRDDD R N YSP                 S SP+RR+R SP
Sbjct: 147 EATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSP 206

Query: 356 DYGHGLGSERGRDRARSPNPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXXXXXXXXXX 177
           DYG G           SP+ +R +R SPDYGR PSP+ + R RA                
Sbjct: 207 DYGRG----------SSPSAYRRERASPDYGRDPSPSPRRRDRAIPDHG----------- 245

Query: 176 DAKPEMRGRT---YRRDSPNVVGGLSPDSKPELRGHTYRRDSPDVGRGSSPN 30
                 R R+   +RR+  +      P   P  R     R  PD GRG SP+
Sbjct: 246 ------RSRSPSHHRRERTSHDSARGPSRSP-YRSERSDRAIPDYGRGRSPS 290


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  100 bits (248), Expect = 2e-19
 Identities = 68/172 (39%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
 Frame = -3

Query: 536 DATNMSKLMDQVVSVEYAVRDDDGRNNRYSPXXXXXXXXXXXXXXXXXSPSPHRRQRDSP 357
           +ATNMSKLMD+V+SVEYAVRDDD R N YSP                 S SP+RR+R SP
Sbjct: 147 EATNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSP 206

Query: 356 DYGHGLGSERGRDRARSPNPHRGDRYSPDYGRGPSPNGKPRSRAYQXXXXXXXXXXXXXX 177
           DYG G           SP+ +R +R SPDYGR PSP+ + R RA                
Sbjct: 207 DYGRG----------SSPSAYRRERASPDYGRDPSPSPRRRDRAMPDHG----------- 245

Query: 176 DAKPEMRGRT---YRRDSPNVVGGLSPDSKPELRGHTYRRDSPDVGRGSSPN 30
                 R R+   +RR+  +      P   P  R     R  PD GRG SP+
Sbjct: 246 ------RSRSPSHHRRERTSHDSARGPSRSP-YRSERSDRAIPDYGRGRSPS 290