BLASTX nr result
ID: Coptis21_contig00018965
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018965 (448 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR18459.1| unknown [Picea sitchensis] 92 9e-27 ref|XP_002982634.1| hypothetical protein SELMODRAFT_155177 [Sela... 92 1e-26 ref|XP_002981151.1| hypothetical protein SELMODRAFT_233646 [Sela... 92 1e-26 ref|XP_002464182.1| hypothetical protein SORBIDRAFT_01g013730 [S... 94 2e-26 ref|NP_001105556.1| MSI type nucleosome/chromatin assembly facto... 94 2e-26 >gb|ABR18459.1| unknown [Picea sitchensis] Length = 421 Score = 92.0 bits (227), Expect(2) = 9e-27 Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 10/65 (15%) Frame = +3 Query: 51 YKVWKKNTPVLYDLVISHALEWPSLTVQWLP----------SSSSLILGTHTCDGAPNFL 200 YK+WKKNTP LYDLVI+HALEWPSLTVQWLP S +ILGTHT D PN+L Sbjct: 21 YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKDYSVQKMILGTHTSDNEPNYL 80 Query: 201 MLAQV 215 MLAQV Sbjct: 81 MLAQV 85 Score = 53.1 bits (126), Expect(2) = 9e-27 Identities = 26/45 (57%), Positives = 34/45 (75%) Frame = +2 Query: 314 RVQITHQIRLDDSDGEINRARYMPQNPHLIAAKTSASDVCVFDSS 448 +VQ+ QI + DGE+NRARYMPQNP +IA KT +++V VFD S Sbjct: 115 KVQVIQQI---NHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYS 156 >ref|XP_002982634.1| hypothetical protein SELMODRAFT_155177 [Selaginella moellendorffii] gi|300149733|gb|EFJ16387.1| hypothetical protein SELMODRAFT_155177 [Selaginella moellendorffii] Length = 434 Score = 92.0 bits (227), Expect(2) = 1e-26 Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 10/65 (15%) Frame = +3 Query: 51 YKVWKKNTPVLYDLVISHALEWPSLTVQWLP----------SSSSLILGTHTCDGAPNFL 200 YK+WKKNTP LYDLVI+HALEWPSLTVQWLP S LILGTHT D PNFL Sbjct: 21 YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRVEPPGKDYSVQKLILGTHTSDNEPNFL 80 Query: 201 MLAQV 215 M+A+V Sbjct: 81 MIAEV 85 Score = 52.8 bits (125), Expect(2) = 1e-26 Identities = 26/45 (57%), Positives = 34/45 (75%) Frame = +2 Query: 314 RVQITHQIRLDDSDGEINRARYMPQNPHLIAAKTSASDVCVFDSS 448 +VQ+ QI + DGE+NRARYMPQNP +IA KT +++V VFD S Sbjct: 115 KVQVIQQI---NHDGEVNRARYMPQNPFVIATKTVSAEVFVFDYS 156 >ref|XP_002981151.1| hypothetical protein SELMODRAFT_233646 [Selaginella moellendorffii] gi|300151205|gb|EFJ17852.1| hypothetical protein SELMODRAFT_233646 [Selaginella moellendorffii] Length = 413 Score = 92.0 bits (227), Expect(2) = 1e-26 Identities = 44/65 (67%), Positives = 48/65 (73%), Gaps = 10/65 (15%) Frame = +3 Query: 51 YKVWKKNTPVLYDLVISHALEWPSLTVQWLP----------SSSSLILGTHTCDGAPNFL 200 YK+WKKNTP LYDLVI+HALEWPSLTVQWLP S LILGTHT D PNFL Sbjct: 21 YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRVEPPGKDYSVQKLILGTHTSDNEPNFL 80 Query: 201 MLAQV 215 M+A+V Sbjct: 81 MIAEV 85 Score = 52.8 bits (125), Expect(2) = 1e-26 Identities = 26/45 (57%), Positives = 34/45 (75%) Frame = +2 Query: 314 RVQITHQIRLDDSDGEINRARYMPQNPHLIAAKTSASDVCVFDSS 448 +VQ+ QI + DGE+NRARYMPQNP +IA KT +++V VFD S Sbjct: 115 KVQVIQQI---NHDGEVNRARYMPQNPFVIATKTVSAEVFVFDYS 156 >ref|XP_002464182.1| hypothetical protein SORBIDRAFT_01g013730 [Sorghum bicolor] gi|241918036|gb|EER91180.1| hypothetical protein SORBIDRAFT_01g013730 [Sorghum bicolor] Length = 431 Score = 93.6 bits (231), Expect(2) = 2e-26 Identities = 47/71 (66%), Positives = 52/71 (73%), Gaps = 11/71 (15%) Frame = +3 Query: 51 YKVWKKNTPVLYDLVISHALEWPSLTVQWLP----------SSSSLILGTHTCDGAPNFL 200 YK+WKKNTP LYDLVI+HALEWPSLTVQWLP S +ILGTHT D PN+L Sbjct: 27 YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEPPGKDHSVQKMILGTHTSDNEPNYL 86 Query: 201 MLAQV-IHLDD 230 MLAQV + LDD Sbjct: 87 MLAQVQLPLDD 97 Score = 50.8 bits (120), Expect(2) = 2e-26 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +2 Query: 314 RVQITHQIRLDDSDGEINRARYMPQNPHLIAAKTSASDVCVFDSS 448 +VQI QI + DGE+NRARYMPQN +IA KT +++V VFD S Sbjct: 121 KVQIVQQI---NHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYS 162 >ref|NP_001105556.1| MSI type nucleosome/chromatin assembly factor C [Zea mays] gi|17017388|gb|AAL33648.1|AF440219_1 MSI type nucleosome/chromatin assembly factor C [Zea mays] gi|224028465|gb|ACN33308.1| unknown [Zea mays] Length = 431 Score = 93.6 bits (231), Expect(2) = 2e-26 Identities = 47/71 (66%), Positives = 52/71 (73%), Gaps = 11/71 (15%) Frame = +3 Query: 51 YKVWKKNTPVLYDLVISHALEWPSLTVQWLP----------SSSSLILGTHTCDGAPNFL 200 YK+WKKNTP LYDLVI+HALEWPSLTVQWLP S +ILGTHT D PN+L Sbjct: 27 YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEPPGKDHSVQKMILGTHTSDNEPNYL 86 Query: 201 MLAQV-IHLDD 230 MLAQV + LDD Sbjct: 87 MLAQVQLPLDD 97 Score = 50.8 bits (120), Expect(2) = 2e-26 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +2 Query: 314 RVQITHQIRLDDSDGEINRARYMPQNPHLIAAKTSASDVCVFDSS 448 +VQI QI + DGE+NRARYMPQN +IA KT +++V VFD S Sbjct: 121 KVQIVQQI---NHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYS 162