BLASTX nr result

ID: Coptis21_contig00018955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018955
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36794.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN82622.1| hypothetical protein VITISV_002313 [Vitis vinifera]    59   3e-07
ref|XP_002277936.1| PREDICTED: long chain acyl-CoA synthetase 7,...    57   2e-06
ref|XP_002315784.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_003592424.1| Annotation was added to scaffolds in Novembe...    55   8e-06

>emb|CBI36794.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -2

Query: 181 MESKAERRLKAIQNHLIXXXXXXXXXXXXXXXXXTAGEYVYEQGYSVVLPEKLHTGKWNV 2
           MES A+RRLKAIQ HL+                  A E+ + QGYSVVLPEKL+TGKWNV
Sbjct: 1   MESTAQRRLKAIQGHLVPITHVLDSHVQTSTT---ASEFFHSQGYSVVLPEKLNTGKWNV 57


>emb|CAN82622.1| hypothetical protein VITISV_002313 [Vitis vinifera]
          Length = 703

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -2

Query: 181 MESKAERRLKAIQNHLIXXXXXXXXXXXXXXXXXTAGEYVYEQGYSVVLPEKLHTGKWNV 2
           MES A+RRLKAIQ HL+                  A E+ + QGYSVVLPEKL+TGKWNV
Sbjct: 1   MESTAQRRLKAIQGHLVPITHVLDSHVQTSTT---ASEFFHTQGYSVVLPEKLNTGKWNV 57


>ref|XP_002277936.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Vitis
           vinifera] gi|297737021|emb|CBI26222.3| unnamed protein
           product [Vitis vinifera]
          Length = 697

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/60 (55%), Positives = 35/60 (58%)
 Frame = -2

Query: 181 MESKAERRLKAIQNHLIXXXXXXXXXXXXXXXXXTAGEYVYEQGYSVVLPEKLHTGKWNV 2
           MES  +RRL AIQ  LI                  AGE+V EQGYSVVLPEKL TGKWNV
Sbjct: 1   MESAPQRRLTAIQTQLIATAGDDRSHSQLLTNQT-AGEFVSEQGYSVVLPEKLETGKWNV 59


>ref|XP_002315784.1| predicted protein [Populus trichocarpa] gi|222864824|gb|EEF01955.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 169 AERRLKAIQNHLIXXXXXXXXXXXXXXXXXTAGEYVYEQGYSVVLPEKLHTGKWNV 2
           A+RR+KAI +HLI                  AGE+  EQGYSVVLPEKL TGKWNV
Sbjct: 11  AQRRIKAIHSHLITAAAHDDSPPQLRHNPT-AGEFFSEQGYSVVLPEKLQTGKWNV 65


>ref|XP_003592424.1| Annotation was added to scaffolds in November 2011~Long chain fatty
           acid-CoA ligase [Medicago truncatula]
           gi|355481472|gb|AES62675.1| Annotation was added to
           scaffolds in November 2011~Long chain fatty acid-CoA
           ligase [Medicago truncatula]
          Length = 697

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/56 (55%), Positives = 33/56 (58%)
 Frame = -2

Query: 169 AERRLKAIQNHLIXXXXXXXXXXXXXXXXXTAGEYVYEQGYSVVLPEKLHTGKWNV 2
           A+RRLKAI  HLI                  AGE+  EQGYSVVLPEKL TGKWNV
Sbjct: 7   AQRRLKAINAHLITAVEDNSSDHLQSNPT--AGEFFSEQGYSVVLPEKLQTGKWNV 60


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