BLASTX nr result

ID: Coptis21_contig00018931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018931
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20785.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/...   155   2e-36
emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]   155   2e-36
ref|XP_002330820.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003563349.1| PREDICTED: cryptochrome DASH, chloroplastic/...   150   1e-34

>emb|CBI20785.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/75 (92%), Positives = 71/75 (94%)
 Frame = -2

Query: 474 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPELQALPKDKRN 295
           LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQA+ YDPEGEYVA+WLPELQALP DKRN
Sbjct: 483 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRN 542

Query: 294 SPGKSYIKQIVPLKF 250
            PGKSYI QIVPLKF
Sbjct: 543 FPGKSYINQIVPLKF 557


>ref|XP_002280771.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 549

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/75 (92%), Positives = 71/75 (94%)
 Frame = -2

Query: 474 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPELQALPKDKRN 295
           LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQA+ YDPEGEYVA+WLPELQALP DKRN
Sbjct: 446 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRN 505

Query: 294 SPGKSYIKQIVPLKF 250
            PGKSYI QIVPLKF
Sbjct: 506 FPGKSYINQIVPLKF 520


>emb|CAN79842.1| hypothetical protein VITISV_014519 [Vitis vinifera]
          Length = 584

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/75 (92%), Positives = 71/75 (94%)
 Frame = -2

Query: 474 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPELQALPKDKRN 295
           LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQA+ YDPEGEYVA+WLPELQALP DKRN
Sbjct: 481 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAFWLPELQALPNDKRN 540

Query: 294 SPGKSYIKQIVPLKF 250
            PGKSYI QIVPLKF
Sbjct: 541 FPGKSYINQIVPLKF 555


>ref|XP_002330820.1| predicted protein [Populus trichocarpa] gi|222872622|gb|EEF09753.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  153 bits (386), Expect = 2e-35
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -2

Query: 474 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPELQALPKDKRN 295
           LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQ YDPEGEYVAYWLP+LQ LPK+KRN
Sbjct: 451 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLQELPKEKRN 510

Query: 294 SPGKSYIKQIVPLKF 250
            PGK Y++QIVPLKF
Sbjct: 511 FPGKLYMEQIVPLKF 525


>ref|XP_003563349.1| PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial-like
           [Brachypodium distachyon]
          Length = 587

 Score =  150 bits (378), Expect = 1e-34
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = -2

Query: 474 LDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPELQALPKDKRN 295
           LDYDP SNYGNWTYGAGVGNDPREDRYFSIPKQA+ YDP+GEYVAYWLPELQ+LPK++RN
Sbjct: 488 LDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPDGEYVAYWLPELQSLPKERRN 547

Query: 294 SPGKSYIKQIVPLKF 250
            PG SYIKQI+PLKF
Sbjct: 548 FPGASYIKQIIPLKF 562