BLASTX nr result

ID: Coptis21_contig00018929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018929
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16448.3| unnamed protein product [Vitis vinifera]              339   5e-91
ref|XP_002285614.1| PREDICTED: UPF0061 protein AZOSEA38000-like ...   339   5e-91
ref|XP_004161576.1| PREDICTED: UPF0061 protein AZOSEA38000-like ...   333   3e-89
ref|XP_004149028.1| PREDICTED: UPF0061 protein AZOSEA38000-like ...   333   3e-89
ref|XP_002297667.1| predicted protein [Populus trichocarpa] gi|2...   332   5e-89

>emb|CBI16448.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  339 bits (869), Expect = 5e-91
 Identities = 169/242 (69%), Positives = 196/242 (80%), Gaps = 9/242 (3%)
 Frame = +1

Query: 133 PFFSSRTPTPATRFYSSPVSKPHLFKTTTLS---------SMDNISAVDSVTNHLKNQSL 285
           PFF S  P+ +++   S   +P +   +  S         S D  + V+S+ + L+NQ L
Sbjct: 63  PFFRSH-PSLSSKLSRSFHFRPGVSSESAFSPSRSMEASPSADAAATVESLADGLRNQRL 121

Query: 286 GSENKLKLKLQDLNWDHSFVRELPADPKTHIMPREVLHACYTKVSPSVQVENPQLVAWSE 465
           GSEN++ L+L+DLNWDHSFV ELP DP+T  +PR+VLHACYTK+SPS +VENPQLVAW E
Sbjct: 122 GSENRVLLRLEDLNWDHSFVHELPGDPRTDPIPRQVLHACYTKISPSAEVENPQLVAWLE 181

Query: 466 SVAELLDLDPEEFKRPDFPLLFSGALPLVGGSPYAQCYGGHQFGTWAGQLGDGRAITLGE 645
           SVAELLDLDP+EF+RPDFPL+FSGA  LVGG PYAQCYGGHQFG WAGQLGDGRAITLGE
Sbjct: 182 SVAELLDLDPKEFERPDFPLIFSGASLLVGGLPYAQCYGGHQFGMWAGQLGDGRAITLGE 241

Query: 646 LLNSRGQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHGLGIPTTRALSLVTT 825
           LLNS+ +RWELQLKGAG+TPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRAL LVTT
Sbjct: 242 LLNSKSERWELQLKGAGRTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLVTT 301

Query: 826 GK 831
           GK
Sbjct: 302 GK 303


>ref|XP_002285614.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Vitis vinifera]
          Length = 651

 Score =  339 bits (869), Expect = 5e-91
 Identities = 169/242 (69%), Positives = 196/242 (80%), Gaps = 9/242 (3%)
 Frame = +1

Query: 133 PFFSSRTPTPATRFYSSPVSKPHLFKTTTLS---------SMDNISAVDSVTNHLKNQSL 285
           PFF S  P+ +++   S   +P +   +  S         S D  + V+S+ + L+NQ L
Sbjct: 42  PFFRSH-PSLSSKLSRSFHFRPGVSSESAFSPSRSMEASPSADAAATVESLADGLRNQRL 100

Query: 286 GSENKLKLKLQDLNWDHSFVRELPADPKTHIMPREVLHACYTKVSPSVQVENPQLVAWSE 465
           GSEN++ L+L+DLNWDHSFV ELP DP+T  +PR+VLHACYTK+SPS +VENPQLVAW E
Sbjct: 101 GSENRVLLRLEDLNWDHSFVHELPGDPRTDPIPRQVLHACYTKISPSAEVENPQLVAWLE 160

Query: 466 SVAELLDLDPEEFKRPDFPLLFSGALPLVGGSPYAQCYGGHQFGTWAGQLGDGRAITLGE 645
           SVAELLDLDP+EF+RPDFPL+FSGA  LVGG PYAQCYGGHQFG WAGQLGDGRAITLGE
Sbjct: 161 SVAELLDLDPKEFERPDFPLIFSGASLLVGGLPYAQCYGGHQFGMWAGQLGDGRAITLGE 220

Query: 646 LLNSRGQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHGLGIPTTRALSLVTT 825
           LLNS+ +RWELQLKGAG+TPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRAL LVTT
Sbjct: 221 LLNSKSERWELQLKGAGRTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLVTT 280

Query: 826 GK 831
           GK
Sbjct: 281 GK 282


>ref|XP_004161576.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Cucumis sativus]
          Length = 566

 Score =  333 bits (854), Expect = 3e-89
 Identities = 171/239 (71%), Positives = 192/239 (80%), Gaps = 16/239 (6%)
 Frame = +1

Query: 160 PATRFYSSPVSKP-HLFKTTTLSSMDNIS-----AVDSVTNHLKNQSLGSENKL------ 303
           P   F S P   P H        SMD+ S     +VDSV   LKNQSL +++++      
Sbjct: 41  PPASFTSLPSPLPAHSRHGRRKLSMDSASPEVSASVDSVAEGLKNQSLNNDDRVDGGSSI 100

Query: 304 ----KLKLQDLNWDHSFVRELPADPKTHIMPREVLHACYTKVSPSVQVENPQLVAWSESV 471
               K KL+DLNWD+SFVRELP DP+T I+PREVLHACY+KV PSV+V++PQLVAWSESV
Sbjct: 101 NHATKKKLEDLNWDNSFVRELPGDPRTDIIPREVLHACYSKVLPSVEVQSPQLVAWSESV 160

Query: 472 AELLDLDPEEFKRPDFPLLFSGALPLVGGSPYAQCYGGHQFGTWAGQLGDGRAITLGELL 651
           A+LLDLDP+EF+RPDFPLLFSGA PLVG SPYAQCYGGHQFG WAGQLGDGRAITLGE+L
Sbjct: 161 ADLLDLDPQEFERPDFPLLFSGASPLVGASPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 220

Query: 652 NSRGQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHGLGIPTTRALSLVTTG 828
           NSR +RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRAL L+TTG
Sbjct: 221 NSRSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLLTTG 279


>ref|XP_004149028.1| PREDICTED: UPF0061 protein AZOSEA38000-like [Cucumis sativus]
          Length = 649

 Score =  333 bits (854), Expect = 3e-89
 Identities = 171/239 (71%), Positives = 192/239 (80%), Gaps = 16/239 (6%)
 Frame = +1

Query: 160 PATRFYSSPVSKP-HLFKTTTLSSMDNIS-----AVDSVTNHLKNQSLGSENKL------ 303
           P   F S P   P H        SMD+ S     +VDSV   LKNQSL +++++      
Sbjct: 41  PPASFTSLPSPLPAHSRHGRRKLSMDSASPEVSASVDSVAEGLKNQSLNNDDRVDGGSSI 100

Query: 304 ----KLKLQDLNWDHSFVRELPADPKTHIMPREVLHACYTKVSPSVQVENPQLVAWSESV 471
               K KL+DLNWD+SFVRELP DP+T I+PREVLHACY+KV PSV+V++PQLVAWSESV
Sbjct: 101 NHATKKKLEDLNWDNSFVRELPGDPRTDIIPREVLHACYSKVLPSVEVQSPQLVAWSESV 160

Query: 472 AELLDLDPEEFKRPDFPLLFSGALPLVGGSPYAQCYGGHQFGTWAGQLGDGRAITLGELL 651
           A+LLDLDP+EF+RPDFPLLFSGA PLVG SPYAQCYGGHQFG WAGQLGDGRAITLGE+L
Sbjct: 161 ADLLDLDPQEFERPDFPLLFSGASPLVGASPYAQCYGGHQFGMWAGQLGDGRAITLGEIL 220

Query: 652 NSRGQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHGLGIPTTRALSLVTTG 828
           NSR +RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH LGIPTTRAL L+TTG
Sbjct: 221 NSRSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHSLGIPTTRALCLLTTG 279


>ref|XP_002297667.1| predicted protein [Populus trichocarpa] gi|222844925|gb|EEE82472.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  332 bits (852), Expect = 5e-89
 Identities = 170/259 (65%), Positives = 197/259 (76%), Gaps = 25/259 (9%)
 Frame = +1

Query: 130 FPFFSSRTPTPATRFYSSPVSKP-HLFKTTTL----------------------SSMDNI 240
           FPF+    P P  +    P+S P HLFK +                        SS +  
Sbjct: 23  FPFY----PPPFVKSQFCPLSPPAHLFKPSLSRHVSTSSFPSSRGRGSSVSMESSSPEPT 78

Query: 241 SAVDSVTNHLKNQSLGSEN--KLKLKLQDLNWDHSFVRELPADPKTHIMPREVLHACYTK 414
            ++DSVT  LKNQ+LG ++  K KLKL+DLNWDHSFVR LP DP+   +PR+V+HACYTK
Sbjct: 79  VSLDSVTQDLKNQTLGPDDVSKAKLKLEDLNWDHSFVRALPGDPRADTIPRQVMHACYTK 138

Query: 415 VSPSVQVENPQLVAWSESVAELLDLDPEEFKRPDFPLLFSGALPLVGGSPYAQCYGGHQF 594
           V PS +VENP+LVAWS+SVA+L DLDP+EF+RPDFPLLFSGA PLVG  PYAQCYGGHQF
Sbjct: 139 VLPSAEVENPELVAWSDSVADLFDLDPKEFERPDFPLLFSGASPLVGALPYAQCYGGHQF 198

Query: 595 GTWAGQLGDGRAITLGELLNSRGQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEA 774
           G WAGQLGDGRAITLGE++NS+ +RWELQLKG+G+TPYSRFADGLAVLRSSIREFLCSEA
Sbjct: 199 GMWAGQLGDGRAITLGEVVNSKSERWELQLKGSGRTPYSRFADGLAVLRSSIREFLCSEA 258

Query: 775 MHGLGIPTTRALSLVTTGK 831
           MH LGIPTTRALSLVTTGK
Sbjct: 259 MHCLGIPTTRALSLVTTGK 277


Top