BLASTX nr result

ID: Coptis21_contig00018924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018924
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268396.1| PREDICTED: uncharacterized protein LOC100241...   123   2e-26
ref|XP_002337001.1| predicted protein [Populus trichocarpa] gi|2...   111   6e-23
ref|XP_003550638.1| PREDICTED: uncharacterized protein LOC100812...   111   8e-23
ref|XP_002527690.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002308095.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22

>ref|XP_002268396.1| PREDICTED: uncharacterized protein LOC100241048 [Vitis vinifera]
          Length = 565

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/113 (51%), Positives = 70/113 (61%)
 Frame = -3

Query: 341 PTIPTPQNDTIVVNNDVGLKENEMPIQENTTSIHDEVPKDDLREGAVFVEPVSMNYGSKC 162
           P     +ND++    D G   +E+ ++ENT  I D      + +          N G  C
Sbjct: 176 PISQISENDSV----DPGTNGSEVAVEENTRPIIDNETSVKIVD----------NGGKNC 221

Query: 161 DLYAGKWVKDEGYPVYKPSSCPYVDEAFNCQGNGRPDSEYLKWRWKPDGCDLP 3
           DLY G WVKDE YP+Y P SCPYVDEAF+CQGNGR DS+YLKWRWKPDGCDLP
Sbjct: 222 DLYMGTWVKDEEYPIYSPGSCPYVDEAFSCQGNGRSDSKYLKWRWKPDGCDLP 274


>ref|XP_002337001.1| predicted protein [Populus trichocarpa] gi|222837554|gb|EEE75919.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  111 bits (278), Expect = 6e-23
 Identities = 69/179 (38%), Positives = 90/179 (50%), Gaps = 43/179 (24%)
 Frame = -3

Query: 410 KNALEPTLSFYKDYL---IWSPLQSPPTI---------------PTPQNDTIVV------ 303
           K ALEP+L FY+D+      +PL S P                 P  +N+TI        
Sbjct: 31  KRALEPSLFFYRDFFPQRATAPLTSSPNFTLPDSEQPVDSATNQPVSRNETIESKTGDDS 90

Query: 302 -----------NNDVGLKENEMPIQENTTSI-----HDEVPKDDLREGAVFV---EPVSM 180
                      +N  G  E+     +N+T++     +++ P  +L  GA      +   M
Sbjct: 91  TKVEVSAENEKDNPDGDFESGGGSSDNSTNVEVSSENEKDPDGNLETGADLDGNDDDKLM 150

Query: 179 NYGSKCDLYAGKWVKDEGYPVYKPSSCPYVDEAFNCQGNGRPDSEYLKWRWKPDGCDLP 3
                CDLY G WVKDE YP+Y+  SCPYVDEAF+CQGNGR DS+YLKWRWKP  CDLP
Sbjct: 151 ASLKSCDLYMGTWVKDEEYPIYEAGSCPYVDEAFDCQGNGRKDSDYLKWRWKPYDCDLP 209


>ref|XP_003550638.1| PREDICTED: uncharacterized protein LOC100812845 [Glycine max]
          Length = 460

 Score =  111 bits (277), Expect = 8e-23
 Identities = 62/140 (44%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
 Frame = -3

Query: 410 KNALEPTLSFYKD-YLIWSPLQSPPTIPTPQ--NDTIVVNNDVGLKENEMPIQENTTSIH 240
           +  L PT S + D YL+  PL SPP  P PQ  + +          E    I + T ++ 
Sbjct: 32  RTTLHPTPSIHSDLYLLLQPL-SPPPPPQPQQPDSSSSFTTTETQPEPVGDIDDATDNVT 90

Query: 239 D-EVPKDDLREGAVFVEPVSMNYGSKCDLYAGKWVKDEGYPVYKPSSCPYVDEAFNCQGN 63
           D E       E A   E V++N   +CDL+ G WVKDE YP+Y+P SCPYVDEA++C+ N
Sbjct: 91  DAESDAQPATENAA--EDVALNL-KECDLFTGTWVKDENYPIYQPGSCPYVDEAYDCKVN 147

Query: 62  GRPDSEYLKWRWKPDGCDLP 3
           GR D+ Y  WRWKPD CDLP
Sbjct: 148 GRTDTLYTNWRWKPDACDLP 167


>ref|XP_002527690.1| conserved hypothetical protein [Ricinus communis]
           gi|223532921|gb|EEF34689.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 537

 Score =  110 bits (274), Expect = 2e-22
 Identities = 73/186 (39%), Positives = 90/186 (48%), Gaps = 50/186 (26%)
 Frame = -3

Query: 410 KNALEPTLSFYKDYLIWSPLQSPPTIPTPQNDTIV------------------VNNDVGL 285
           K ALEP+LS Y+D+   + L    +     ND+++                  V+ DV  
Sbjct: 61  KRALEPSLSLYRDFFPQTKLHFSSSESDAINDSLLALRPVSPFSQTQSIDPNPVSGDVPF 120

Query: 284 KENEMPIQENT---------------------TSIHDEVPKDDLREGAVFVEPV---SMN 177
            E +   QE T                      S + E   D  +E   +  PV   S N
Sbjct: 121 GEEKQ--QEETFLDSEAWTHQPVSAFSPNRSIESSNGETTIDYKKEPISYSRPVAALSDN 178

Query: 176 YGSK-------CDLYAGKWVKDEG-YPVYKPSSCPYVDEAFNCQGNGRPDSEYLKWRWKP 21
            G K       C+LY G WVKDE  YP+YKPSSCPYVDEAF+CQ NGR DS+YLKWRWKP
Sbjct: 179 GGDKLIENAKNCNLYMGTWVKDEEHYPIYKPSSCPYVDEAFDCQSNGRRDSDYLKWRWKP 238

Query: 20  DGCDLP 3
           D CDLP
Sbjct: 239 DTCDLP 244


>ref|XP_002308095.1| predicted protein [Populus trichocarpa] gi|222854071|gb|EEE91618.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  108 bits (269), Expect = 6e-22
 Identities = 43/54 (79%), Positives = 47/54 (87%)
 Frame = -3

Query: 164 CDLYAGKWVKDEGYPVYKPSSCPYVDEAFNCQGNGRPDSEYLKWRWKPDGCDLP 3
           CDLY G WVKDE YP+YK  SCPYVDEAF+CQGNGR DS+YLKWRWKP+ CDLP
Sbjct: 10  CDLYRGTWVKDEEYPIYKAGSCPYVDEAFDCQGNGRKDSDYLKWRWKPNDCDLP 63


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