BLASTX nr result

ID: Coptis21_contig00018921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018921
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539156.1| PREDICTED: endoglucanase-like [Glycine max]       239   2e-96
ref|XP_002312657.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-94
ref|XP_003524250.1| PREDICTED: uncharacterized protein LOC100790...   229   2e-94
ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-93
ref|XP_002285424.1| PREDICTED: uncharacterized protein LOC100244...   217   2e-92

>ref|XP_003539156.1| PREDICTED: endoglucanase-like [Glycine max]
          Length = 544

 Score =  239 bits (610), Expect(3) = 2e-96
 Identities = 115/190 (60%), Positives = 134/190 (70%), Gaps = 1/190 (0%)
 Frame = +2

Query: 38  VISTIGENDVMVILDNHITTPGWCCNATXXXXXXXXXXXXPKRWIRGFSQMATIFKDTKY 217
           V+ ++GENDVMVILDNH++ PGWCC+              P  WI G ++MATIFK    
Sbjct: 140 VVKSLGENDVMVILDNHVSQPGWCCSNLDGNGFFGDQYFDPDLWIMGLTKMATIFKGVTN 199

Query: 218 VIG-SLRNELRGPRQSVNVWYRYMQQGAETVHAANPKVLVILSGLEFDKNLSFVRTHPVK 394
           V+  SLRNELRGPRQ+VNVWYRYM +GAE VHAANP VLVILSGL FD NLSF+R   VK
Sbjct: 200 VVAMSLRNELRGPRQNVNVWYRYMPKGAEAVHAANPDVLVILSGLNFDTNLSFIRNEAVK 259

Query: 395 VSFMRKLIFEGHWYGFSDNTRWVENNPNDYCGHFMNNVENKFVFLLKQGYPVFLSEFGVD 574
           +SF  KL+FE HWY FSD   W   NPN  CG    NV  +  FLL QG+P+F+SEFGVD
Sbjct: 260 LSFNGKLVFEVHWYSFSDGQAWTLGNPNQVCGQVTENVMRRAGFLLDQGWPLFVSEFGVD 319

Query: 575 QRGTTVNDNR 604
            RGT+VNDNR
Sbjct: 320 LRGTSVNDNR 329



 Score =  128 bits (322), Expect(3) = 2e-96
 Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 6/134 (4%)
 Frame = +1

Query: 604 GSYYLREGKFRLDKVYELLSRDWCNVRNSTYCKRVQAIEAPFRGPGVSGGKPHRTVFHPS 783
           G+YY+R+G   +++ + +L+ DW  VRN+++ +R+ AI+ PF+GPG+S  KP++ +FHP 
Sbjct: 352 GNYYIRQGDVGMEEYFGILNSDWIQVRNTSFLQRISAIQLPFKGPGLSEAKPYKVIFHPL 411

Query: 784 TGLCIQEG------LRLGSCNDTQAWNYIPHKNMTLGGSDLCVQTVGLGLPPTLGNDCID 945
           TGLCI         +RLG C+++ AW Y   K +++ G+  C+Q    G    LGN C  
Sbjct: 412 TGLCILRNSPVEPLMRLGPCSNSDAWEYTDQKILSIKGTYFCLQAEEEGKQAKLGNACSG 471

Query: 946 STSKWEVISKSKMH 987
           S S+WE+IS SKMH
Sbjct: 472 SNSRWEMISDSKMH 485



 Score = 34.7 bits (78), Expect(3) = 2e-96
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +2

Query: 986  TPNGAIVCLVTNEEVTIVTNECKCLEKDYKCD 1081
            T N + VCL  +    IVTN C+CL KD  CD
Sbjct: 490  TNNASGVCLDVDTNNIIVTNICQCLSKDNTCD 521


>ref|XP_002312657.1| predicted protein [Populus trichocarpa] gi|222852477|gb|EEE90024.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  236 bits (602), Expect(2) = 1e-94
 Identities = 108/190 (56%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +2

Query: 38  VISTIGENDVMVILDNHITTPGWCCNATXXXXXXXXXXXXPKRWIRGFSQMATIFKDTKY 217
           V+S++G+N+VMVILDNHI+ PGWCC+ +            P  WI G ++MA++F     
Sbjct: 120 VVSSLGDNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFNGVPN 179

Query: 218 VIG-SLRNELRGPRQSVNVWYRYMQQGAETVHAANPKVLVILSGLEFDKNLSFVRTHPVK 394
           V+G SLRNELRGP+Q+VN WYRYMQ+GAE VH+ANP V+VILSGL +DK+LSF+R  PV 
Sbjct: 180 VVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVN 239

Query: 395 VSFMRKLIFEGHWYGFSDNTRWVENNPNDYCGHFMNNVENKFVFLLKQGYPVFLSEFGVD 574
           ++F RK++FE HWYGF+D   W   NPN  CG  ++N+     FLL QG+P+F+SEFGVD
Sbjct: 240 LTFSRKIVFEVHWYGFTDGQAWKNGNPNQVCGRVVDNMMRISGFLLDQGWPLFMSEFGVD 299

Query: 575 QRGTTVNDNR 604
           QRGT VNDNR
Sbjct: 300 QRGTNVNDNR 309



 Score =  138 bits (347), Expect(2) = 1e-94
 Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 5/133 (3%)
 Frame = +1

Query: 604 GSYYLREGKFRLDKVYELLSRDWCNVRNSTYCKRVQAIEAPFRGPGVSGGKPHRTVFHPS 783
           GSYY R+G   +++ Y +L+ +W   RNST+ +++ A+++PFRGPGVS    H+ +FHPS
Sbjct: 332 GSYYFRQGVIGMNEYYGVLNSNWRETRNSTFLQQISALQSPFRGPGVSEVHLHKVIFHPS 391

Query: 784 TGLCIQ-----EGLRLGSCNDTQAWNYIPHKNMTLGGSDLCVQTVGLGLPPTLGNDCIDS 948
           TGLC+      E LRLG C  ++AWNY P K +++ G+  C+QT  L  P  LG  C DS
Sbjct: 392 TGLCVLRKSMFEPLRLGPCTQSEAWNYTPQKILSVKGTYFCLQTDELAKPAKLGIICTDS 451

Query: 949 TSKWEVISKSKMH 987
            SKWE IS SKMH
Sbjct: 452 NSKWEAISDSKMH 464


>ref|XP_003524250.1| PREDICTED: uncharacterized protein LOC100790415 [Glycine max]
          Length = 557

 Score =  229 bits (585), Expect(3) = 2e-94
 Identities = 105/196 (53%), Positives = 137/196 (69%), Gaps = 1/196 (0%)
 Frame = +2

Query: 20  IFSLKNVISTIGENDVMVILDNHITTPGWCCNATXXXXXXXXXXXXPKRWIRGFSQMATI 199
           I + + V+ ++G+NDVMVILDNHIT PGWCC+ +            P +WI G ++MA++
Sbjct: 137 IQAFQAVVKSLGDNDVMVILDNHITQPGWCCSNSDGNGFFGDKFFDPNQWILGLTKMASL 196

Query: 200 FKDTKYVIG-SLRNELRGPRQSVNVWYRYMQQGAETVHAANPKVLVILSGLEFDKNLSFV 376
           F     V+G SLRNELRGP+Q+VN WY+YM +GAE +HAANP VLVILSGL FDK+LSF+
Sbjct: 197 FNGVTNVVGMSLRNELRGPKQNVNDWYKYMVKGAEAIHAANPDVLVILSGLNFDKDLSFI 256

Query: 377 RTHPVKVSFMRKLIFEGHWYGFSDNTRWVENNPNDYCGHFMNNVENKFVFLLKQGYPVFL 556
           +  PV ++F  KL++E HWY F+D   WV  NPN  CG    N+     FL+ QG+P+F+
Sbjct: 257 QNRPVSLTFKGKLVYEAHWYAFTDGQAWVNGNPNQVCGQVAGNMMRTSGFLVNQGWPLFI 316

Query: 557 SEFGVDQRGTTVNDNR 604
           SEFG D RGT VNDNR
Sbjct: 317 SEFGGDLRGTNVNDNR 332



 Score =  130 bits (328), Expect(3) = 2e-94
 Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
 Frame = +1

Query: 604 GSYYLREGKFRLDKVYELLSRDWCNVRNSTYCKRVQAIEAPFRGPGVSGGKPHRTVFHPS 783
           GSYY R+G   +++ Y +LS DW  VRN+T+  R+ A++ PFRGPG++ G P++ +FHP 
Sbjct: 355 GSYYFRQGVIGMEEFYGILSWDWTQVRNTTFLNRISALQLPFRGPGITRGNPYKLIFHPL 414

Query: 784 TGLCI-----QEGLRLGSCNDTQAWNYIPHKNMTLGGSDLCVQTVGLGLPPTLGNDCIDS 948
           TGLC+      + L LG C  +  W Y P K +++ G+  C+Q    G+P  LG  C D 
Sbjct: 415 TGLCVIRKSLLDPLTLGPCYLSDGWKYTPQKILSIKGTYFCIQAENEGMPAKLGIICSDP 474

Query: 949 TSKWEVISKSKMH 987
            S+WE+IS SK+H
Sbjct: 475 NSRWEMISDSKLH 487



 Score = 35.0 bits (79), Expect(3) = 2e-94
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 1004 VCLVTNEEVTIVTNECKCLEKDYKCD 1081
            VCL  ++   IVTN CKCL +D  CD
Sbjct: 498  VCLDVDDNNNIVTNACKCLSRDRTCD 523


>ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|222864693|gb|EEF01824.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  231 bits (589), Expect(2) = 3e-93
 Identities = 107/190 (56%), Positives = 138/190 (72%), Gaps = 1/190 (0%)
 Frame = +2

Query: 38  VISTIGENDVMVILDNHITTPGWCCNATXXXXXXXXXXXXPKRWIRGFSQMATIFKDTKY 217
           V+S++G N+VMVILDNHI+ PGWCC+ +            P  WI G ++MA++FK    
Sbjct: 113 VVSSLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFKGVPN 172

Query: 218 VIG-SLRNELRGPRQSVNVWYRYMQQGAETVHAANPKVLVILSGLEFDKNLSFVRTHPVK 394
           V+G SLRNELRGP+Q+VN WYRYMQ+GAE VH+ANP V+VILSGL +DK+LSF+R  PV 
Sbjct: 173 VVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVIVILSGLNYDKDLSFLRNRPVH 232

Query: 395 VSFMRKLIFEGHWYGFSDNTRWVENNPNDYCGHFMNNVENKFVFLLKQGYPVFLSEFGVD 574
           ++F  K++FE HWYGF+D   W   N N  CG  ++N+     FLL QG+P+F+SEFGVD
Sbjct: 233 LTFSGKIVFEVHWYGFTDGEAWKSGNSNQVCGRVVDNMMRVSGFLLDQGWPLFVSEFGVD 292

Query: 575 QRGTTVNDNR 604
           QRGT VNDNR
Sbjct: 293 QRGTNVNDNR 302



 Score =  139 bits (349), Expect(2) = 3e-93
 Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
 Frame = +1

Query: 604 GSYYLREGKFRLDKVYELLSRDWCNVRNSTYCKRVQAIEAPFRGPGVSGGKPHRTVFHPS 783
           GSYYLR+G   +++ Y +L+ +W  VRNST+ + + A+++PFRGPG+S   PH+ +FHPS
Sbjct: 325 GSYYLRQGVIGMNEYYGVLNWNWREVRNSTFLQLISALQSPFRGPGLSEANPHKVIFHPS 384

Query: 784 TGLCIQE-----GLRLGSCNDTQAWNYIPHKNMTLGGSDLCVQTVGLGLPPTLGNDCIDS 948
           TGLC+        LRLG C +++AW+Y P K +++ G+  C+QT     P  LG  C DS
Sbjct: 385 TGLCVLRKSMLAPLRLGRCTESEAWSYTPQKILSVKGTYFCLQTDDAAKPAKLGIICTDS 444

Query: 949 TSKWEVISKSKMH 987
            SKWE IS SKMH
Sbjct: 445 NSKWETISDSKMH 457


>ref|XP_002285424.1| PREDICTED: uncharacterized protein LOC100244027 [Vitis vinifera]
          Length = 552

 Score =  217 bits (553), Expect(3) = 2e-92
 Identities = 100/196 (51%), Positives = 140/196 (71%), Gaps = 1/196 (0%)
 Frame = +2

Query: 20  IFSLKNVISTIGENDVMVILDNHITTPGWCCNATXXXXXXXXXXXXPKRWIRGFSQMATI 199
           I + + V+S + +N+VMVILDNH++ PGWCC++             P  W++G ++MAT+
Sbjct: 131 ISAYQAVVSGLADNNVMVILDNHLSKPGWCCSSFDGNGFFGDQYFNPDLWVQGLTRMATM 190

Query: 200 FKDTKYVIG-SLRNELRGPRQSVNVWYRYMQQGAETVHAANPKVLVILSGLEFDKNLSFV 376
           F+    V+G SLRNELRGP+Q+V  WYRYMQ+GAE VH+ANP VLVI+SGL +D +LSFV
Sbjct: 191 FRGVTNVVGMSLRNELRGPKQNVKDWYRYMQKGAEAVHSANPDVLVIVSGLSYDTDLSFV 250

Query: 377 RTHPVKVSFMRKLIFEGHWYGFSDNTRWVENNPNDYCGHFMNNVENKFVFLLKQGYPVFL 556
               ++++F  KL+FE HWYGF+D + W   +PN  CG  + +V  +   LL++G+P+F+
Sbjct: 251 LKQELELTFTGKLVFEMHWYGFTDGSAWETGSPNQVCGRVVESVMRRGGVLLEKGWPLFV 310

Query: 557 SEFGVDQRGTTVNDNR 604
           SEFGVDQRGT VNDNR
Sbjct: 311 SEFGVDQRGTNVNDNR 326



 Score =  134 bits (338), Expect(3) = 2e-92
 Identities = 62/133 (46%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
 Frame = +1

Query: 604 GSYYLREGKFRLDKVYELLSRDWCNVRNSTYCKRVQAIEAPFRGPGVSGGKPHRTVFHPS 783
           GSYY REG   L++ Y LL+ +WC VRNS++ +R+ A+++PF+GP +S  +PH+ +FHP+
Sbjct: 349 GSYYTREGVIGLEEFYGLLNWNWCEVRNSSFLQRISALQSPFQGPDLSDARPHKVIFHPA 408

Query: 784 TGLCIQ-----EGLRLGSCNDTQAWNYIPHKNMTLGGSDLCVQTVGLGLPPTLGNDCIDS 948
           TGLCI      E L LG C ++ AW+Y P K + +  +  C+Q  G G P  LG  C + 
Sbjct: 409 TGLCIVWKSVFEPLTLGPCPESDAWSYTPQKTLIMKETYFCLQADGPGNPGKLGIICTEP 468

Query: 949 TSKWEVISKSKMH 987
            SKWE IS SKMH
Sbjct: 469 GSKWESISDSKMH 481



 Score = 37.0 bits (84), Expect(3) = 2e-92
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 992  NGAIVCLVTNEEVTIVTNECKCLEKDYKCD 1081
            +G  VCL  +    IVTN CKCL  D KCD
Sbjct: 488  DGTTVCLDIDSSNNIVTNACKCLSGDNKCD 517


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