BLASTX nr result

ID: Coptis21_contig00018903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018903
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor al...   266   2e-69
ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor al...   266   2e-69
emb|CAN64340.1| hypothetical protein VITISV_031564 [Vitis vinifera]   258   5e-67
ref|XP_002268877.1| PREDICTED: rab GDP dissociation inhibitor al...   257   1e-66
ref|XP_002533685.1| protein with unknown function [Ricinus commu...   257   1e-66

>ref|XP_004155432.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 445

 Score =  266 bits (681), Expect = 2e-69
 Identities = 125/143 (87%), Positives = 134/143 (93%)
 Frame = -3

Query: 645 SYLPDKVKKVGKVARAICIMSHPIPETSDSHSVQVILPQKQLGRKSDMYLFCCSYTHNVA 466
           SYLPDKVKKVGKVARA+CIMSHPIP+T+DSHS QVILPQKQLGRKSDMYLFCCSY HNVA
Sbjct: 286 SYLPDKVKKVGKVARAVCIMSHPIPDTNDSHSAQVILPQKQLGRKSDMYLFCCSYAHNVA 345

Query: 465 PKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINNHDEDHCFISKSY 286
           PKGK+IAFVSTEAETD PE ELKPGI+LLGPVDEIFYE YDRY PINNH+ D+CFIS SY
Sbjct: 346 PKGKFIAFVSTEAETDNPEVELKPGIDLLGPVDEIFYETYDRYVPINNHETDNCFISTSY 405

Query: 285 DGTTHFESTVQDVLAMYSQITGK 217
           DG+THFESTV DVLAMYS+ITGK
Sbjct: 406 DGSTHFESTVTDVLAMYSKITGK 428


>ref|XP_004137066.1| PREDICTED: rab GDP dissociation inhibitor alpha-like [Cucumis
           sativus]
          Length = 469

 Score =  266 bits (681), Expect = 2e-69
 Identities = 125/143 (87%), Positives = 134/143 (93%)
 Frame = -3

Query: 645 SYLPDKVKKVGKVARAICIMSHPIPETSDSHSVQVILPQKQLGRKSDMYLFCCSYTHNVA 466
           SYLPDKVKKVGKVARA+CIMSHPIP+T+DSHS QVILPQKQLGRKSDMYLFCCSY HNVA
Sbjct: 310 SYLPDKVKKVGKVARAVCIMSHPIPDTNDSHSAQVILPQKQLGRKSDMYLFCCSYAHNVA 369

Query: 465 PKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINNHDEDHCFISKSY 286
           PKGK+IAFVSTEAETD PE ELKPGI+LLGPVDEIFYE YDRY PINNH+ D+CFIS SY
Sbjct: 370 PKGKFIAFVSTEAETDNPEVELKPGIDLLGPVDEIFYETYDRYVPINNHETDNCFISTSY 429

Query: 285 DGTTHFESTVQDVLAMYSQITGK 217
           DG+THFESTV DVLAMYS+ITGK
Sbjct: 430 DGSTHFESTVTDVLAMYSKITGK 452


>emb|CAN64340.1| hypothetical protein VITISV_031564 [Vitis vinifera]
          Length = 445

 Score =  258 bits (660), Expect = 5e-67
 Identities = 123/143 (86%), Positives = 131/143 (91%)
 Frame = -3

Query: 645 SYLPDKVKKVGKVARAICIMSHPIPETSDSHSVQVILPQKQLGRKSDMYLFCCSYTHNVA 466
           SYLPDKV  VGKVARAICIMSHPIP TSDSHSVQVILPQKQLGRKSDMYLFCCSY+HNVA
Sbjct: 286 SYLPDKVGTVGKVARAICIMSHPIPNTSDSHSVQVILPQKQLGRKSDMYLFCCSYSHNVA 345

Query: 465 PKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINNHDEDHCFISKSY 286
           PKGKYIAFV+TEAETD PE ELKPGIELLG VDEIF++ YDRYEP N  DED+CFIS SY
Sbjct: 346 PKGKYIAFVTTEAETDNPEIELKPGIELLGQVDEIFFDAYDRYEPANKQDEDNCFISTSY 405

Query: 285 DGTTHFESTVQDVLAMYSQITGK 217
           D TTHFESTV+DV+AMYS+ITGK
Sbjct: 406 DATTHFESTVEDVIAMYSRITGK 428


>ref|XP_002268877.1| PREDICTED: rab GDP dissociation inhibitor alpha [Vitis vinifera]
           gi|296087426|emb|CBI34015.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score =  257 bits (657), Expect = 1e-66
 Identities = 120/143 (83%), Positives = 135/143 (94%)
 Frame = -3

Query: 645 SYLPDKVKKVGKVARAICIMSHPIPETSDSHSVQVILPQKQLGRKSDMYLFCCSYTHNVA 466
           SYLPDKV+KVGKVARAICIMSH IP+T+DSHSVQVILPQKQLGRKSDMYLFCCSY+HNVA
Sbjct: 286 SYLPDKVQKVGKVARAICIMSHSIPDTNDSHSVQVILPQKQLGRKSDMYLFCCSYSHNVA 345

Query: 465 PKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINNHDEDHCFISKSY 286
           PKGKYIAFV+TEAETDQPE ELK G++LLGPVDEIFYE YDR+EP N+H+ DHCFIS SY
Sbjct: 346 PKGKYIAFVTTEAETDQPEVELKRGVDLLGPVDEIFYETYDRFEPKNDHEVDHCFISTSY 405

Query: 285 DGTTHFESTVQDVLAMYSQITGK 217
           D TTHFESTV++V+AMYS+ITG+
Sbjct: 406 DATTHFESTVKNVIAMYSKITGE 428


>ref|XP_002533685.1| protein with unknown function [Ricinus communis]
           gi|223526420|gb|EEF28701.1| protein with unknown
           function [Ricinus communis]
          Length = 445

 Score =  257 bits (656), Expect = 1e-66
 Identities = 119/143 (83%), Positives = 131/143 (91%)
 Frame = -3

Query: 645 SYLPDKVKKVGKVARAICIMSHPIPETSDSHSVQVILPQKQLGRKSDMYLFCCSYTHNVA 466
           SYLP+KVK +GKVARAICIMSHPIP T DSHSVQVILPQKQL RKSDMYLFCCSYTHNVA
Sbjct: 286 SYLPNKVKTIGKVARAICIMSHPIPNTHDSHSVQVILPQKQLARKSDMYLFCCSYTHNVA 345

Query: 465 PKGKYIAFVSTEAETDQPEAELKPGIELLGPVDEIFYEIYDRYEPINNHDEDHCFISKSY 286
           PKGKYIAFV+TEAETD P+ ELKPG++LLGPVDE+F+E YDRYEP N HD D+CFIS SY
Sbjct: 346 PKGKYIAFVTTEAETDDPQTELKPGLDLLGPVDEMFFETYDRYEPTNQHDVDNCFISTSY 405

Query: 285 DGTTHFESTVQDVLAMYSQITGK 217
           D TTHFE+TVQDV+AMYS+ITGK
Sbjct: 406 DATTHFETTVQDVIAMYSKITGK 428


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