BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018895
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi...   362   6e-98
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]        359   6e-97
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   358   1e-96
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo...   358   1e-96

>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  390 bits (1003), Expect = e-106
 Identities = 177/249 (71%), Positives = 217/249 (87%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3    FNSM-KDYGVVPLEVHYACMVDLLGRAGHLHEAEELIENMPIEPDSVVWAALLGGCRIHQ 179
            FNSM + YG++PL  HY CMVDLLGRAG+L EAE LIENMP++PDSV+W ALLG CRIH+
Sbjct: 810  FNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHR 869

Query: 180  NVELGRKVAERLFQLEPQKTGNYVLLSNIYASLGMWEEVEEVRKLMRDRGVAKEPGISWI 359
            NVELG++VAERLFQ+   K+  YVLLSN++AS GMW++V E+RKLM+D+G+ KEPGISWI
Sbjct: 870  NVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWI 929

Query: 360  QIKNKLLSFVNGDKSQDHIEEVYATLKEFYGRLREVGYVPDTNFVLHDVEEEQKENALLY 539
            Q+KNKL  FV GD++ D IEE+Y+ LKE+YG  R  GY+PDTNFVLHDVEEEQK+N LLY
Sbjct: 930  QVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLY 989

Query: 540  HSEKLAIGYGLLNTPHGTSIQIMKNLRICGDCHSFTKFLSKVTQREIVIRDGNRFHHFQD 719
            HSEKLA+ +G+L+TP+G+ IQI+KNLRICGDCH+F KF+SKVT R+I+IRDGNRFHHF+D
Sbjct: 990  HSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRD 1049

Query: 720  GSCSCGDYW 746
            GSCSCGDYW
Sbjct: 1050 GSCSCGDYW 1058


>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Brachypodium distachyon]
          Length = 921

 Score =  362 bits (930), Expect = 6e-98
 Identities = 167/249 (67%), Positives = 205/249 (82%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3    FNSM-KDYGVVPLEVHYACMVDLLGRAGHLHEAEELIENMPIEPDSVVWAALLGGCRIHQ 179
            F SM +DYG+ PL  HYACMVDLLGR G +  AE+ I +MPIEPD+V+W+ALLG C+IH+
Sbjct: 673  FKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHK 732

Query: 180  NVELGRKVAERLFQLEPQKTGNYVLLSNIYASLGMWEEVEEVRKLMRDRGVAKEPGISWI 359
            N E+GR+ AE+LF  EP   GNYV+LSNIY+SLGMW EV E+RK+M+ RGV+KEPG SW+
Sbjct: 733  NAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWM 792

Query: 360  QIKNKLLSFVNGDKSQDHIEEVYATLKEFYGRLREVGYVPDTNFVLHDVEEEQKENALLY 539
            QI+NK+ SFV GDK  + IEE+  TL++ Y  LR  GYVPDT FVLHD++EEQKE++LLY
Sbjct: 793  QIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLY 852

Query: 540  HSEKLAIGYGLLNTPHGTSIQIMKNLRICGDCHSFTKFLSKVTQREIVIRDGNRFHHFQD 719
            HSEKLA+ YGLL TP G  IQIMKNLRICGDCH+F KF+S VT+R+I IRDGNRFHHF++
Sbjct: 853  HSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRN 912

Query: 720  GSCSCGDYW 746
            GSCSCGD+W
Sbjct: 913  GSCSCGDFW 921


>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  359 bits (921), Expect = 6e-97
 Identities = 166/245 (67%), Positives = 203/245 (82%), Gaps = 1/245 (0%)
 Frame = +3

Query: 3    FNSMK-DYGVVPLEVHYACMVDLLGRAGHLHEAEELIENMPIEPDSVVWAALLGGCRIHQ 179
            F SM  DYG+ PL  HYACMVDLLGRAG +  AE  I +MPIEPDSV+W+ALLG C+IH+
Sbjct: 673  FKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHK 732

Query: 180  NVELGRKVAERLFQLEPQKTGNYVLLSNIYASLGMWEEVEEVRKLMRDRGVAKEPGISWI 359
            NVE+GR+ AE+LF +EP   GNYV+LSNIY+S GMW+EV +VRKLM++RGV K+PG SW+
Sbjct: 733  NVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWM 792

Query: 360  QIKNKLLSFVNGDKSQDHIEEVYATLKEFYGRLREVGYVPDTNFVLHDVEEEQKENALLY 539
            QIKNK+ SFV GD+  + I+ +YATL E Y  L+  GYVPDT+FVLHD++EEQKE++LLY
Sbjct: 793  QIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLY 852

Query: 540  HSEKLAIGYGLLNTPHGTSIQIMKNLRICGDCHSFTKFLSKVTQREIVIRDGNRFHHFQD 719
            HSEKLA+ YGLL TP G  IQIMKNLRICGDCH+F KF+S VT+REI +RDGNRFHHF++
Sbjct: 853  HSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRN 912

Query: 720  GSCSC 734
            GSCSC
Sbjct: 913  GSCSC 917


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
            gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|218190072|gb|EEC72499.1| hypothetical protein
            OsI_05871 [Oryza sativa Indica Group]
            gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
            Japonica Group]
          Length = 922

 Score =  358 bits (919), Expect = 1e-96
 Identities = 164/249 (65%), Positives = 204/249 (81%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3    FNSM-KDYGVVPLEVHYACMVDLLGRAGHLHEAEELIENMPIEPDSVVWAALLGGCRIHQ 179
            F SM +DYG+ PL  HYACMVDLLGR G +  AE+ I +MPIEPD+V+W+ALLG C+IH+
Sbjct: 674  FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHK 733

Query: 180  NVELGRKVAERLFQLEPQKTGNYVLLSNIYASLGMWEEVEEVRKLMRDRGVAKEPGISWI 359
            N E+G++ AE+LF++EP   GNYV+LSNIY+SLGMW EV EVRK+M+ +GV KEPG SW 
Sbjct: 734  NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793

Query: 360  QIKNKLLSFVNGDKSQDHIEEVYATLKEFYGRLREVGYVPDTNFVLHDVEEEQKENALLY 539
            QIK+K+ SFV GDK  + IEE+ ATL+E Y  L+  GYVPDT FVLHD++EEQKE++LLY
Sbjct: 794  QIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLY 853

Query: 540  HSEKLAIGYGLLNTPHGTSIQIMKNLRICGDCHSFTKFLSKVTQREIVIRDGNRFHHFQD 719
            HSEKLA+ Y LL TP G  IQI+KNLRICGDCH+F KF+S VT+R+I IRDGNRFHHF++
Sbjct: 854  HSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRN 913

Query: 720  GSCSCGDYW 746
            GSCSC D+W
Sbjct: 914  GSCSCEDFW 922


>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  358 bits (919), Expect = 1e-96
 Identities = 164/249 (65%), Positives = 204/249 (81%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3    FNSM-KDYGVVPLEVHYACMVDLLGRAGHLHEAEELIENMPIEPDSVVWAALLGGCRIHQ 179
            F SM +DYG+ PL  HYACMVDLLGR G +  AE+ I +MPIEPD+V+W+ALLG C+IH+
Sbjct: 674  FKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHK 733

Query: 180  NVELGRKVAERLFQLEPQKTGNYVLLSNIYASLGMWEEVEEVRKLMRDRGVAKEPGISWI 359
            N E+G++ AE+LF++EP   GNYV+LSNIY+SLGMW EV EVRK+M+ +GV KEPG SW 
Sbjct: 734  NAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWT 793

Query: 360  QIKNKLLSFVNGDKSQDHIEEVYATLKEFYGRLREVGYVPDTNFVLHDVEEEQKENALLY 539
            QIK+K+ SFV GDK  + IEE+ ATL+E Y  L+  GYVPDT FVLHD++EEQKE++LLY
Sbjct: 794  QIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLY 853

Query: 540  HSEKLAIGYGLLNTPHGTSIQIMKNLRICGDCHSFTKFLSKVTQREIVIRDGNRFHHFQD 719
            HSEKLA+ Y LL TP G  IQI+KNLRICGDCH+F KF+S VT+R+I IRDGNRFHHF++
Sbjct: 854  HSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRN 913

Query: 720  GSCSCGDYW 746
            GSCSC D+W
Sbjct: 914  GSCSCEDFW 922