BLASTX nr result

ID: Coptis21_contig00018893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018893
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526650.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|NP_176960.1| Golgi transport complex-related protein [Arabid...    84   2e-14
ref|XP_002888635.1| hypothetical protein ARALYDRAFT_475901 [Arab...    83   3e-14
ref|XP_003545210.1| PREDICTED: conserved oligomeric Golgi comple...    82   3e-14
ref|XP_003519549.1| PREDICTED: conserved oligomeric Golgi comple...    82   3e-14

>ref|XP_002526650.1| conserved hypothetical protein [Ricinus communis]
           gi|223534017|gb|EEF35738.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 845

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   EDQIWKGIKATLDDYAVKVRSRGDKEFSPVYPLMLRLGSSISETA 135
           EDQIWKGIKATLDDYA KVRSRGDKEFSPVYPLMLR+GSS++E A
Sbjct: 795 EDQIWKGIKATLDDYAAKVRSRGDKEFSPVYPLMLRIGSSLTENA 839


>ref|NP_176960.1| Golgi transport complex-related protein [Arabidopsis thaliana]
           gi|12324079|gb|AAG52007.1|AC012563_17 putative golgi
           transport complex protein; 67058-70172 [Arabidopsis
           thaliana] gi|332196602|gb|AEE34723.1| Golgi transport
           complex-related protein [Arabidopsis thaliana]
          Length = 832

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/43 (86%), Positives = 43/43 (100%)
 Frame = +1

Query: 1   EDQIWKGIKATLDDYAVKVRSRGDKEFSPVYPLMLRLGSSISE 129
           EDQIWKGIKATLDDYAVK+RSRGDKEFSPVYPLML++GSS+++
Sbjct: 787 EDQIWKGIKATLDDYAVKIRSRGDKEFSPVYPLMLQIGSSLTQ 829


>ref|XP_002888635.1| hypothetical protein ARALYDRAFT_475901 [Arabidopsis lyrata subsp.
           lyrata] gi|297334476|gb|EFH64894.1| hypothetical protein
           ARALYDRAFT_475901 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = +1

Query: 1   EDQIWKGIKATLDDYAVKVRSRGDKEFSPVYPLMLRLGSSIS 126
           EDQIWKGIKATLDDYAVK+RSRGDKEFSPVYPLML++GSS++
Sbjct: 786 EDQIWKGIKATLDDYAVKIRSRGDKEFSPVYPLMLQIGSSLT 827


>ref|XP_003545210.1| PREDICTED: conserved oligomeric Golgi complex subunit 5-like
           [Glycine max]
          Length = 833

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   EDQIWKGIKATLDDYAVKVRSRGDKEFSPVYPLMLRLGSSISETAQS 141
           EDQIWKGIKATLDDYA  VRSRGDKEFSPVYPLML+LGSS+ E  Q+
Sbjct: 783 EDQIWKGIKATLDDYAANVRSRGDKEFSPVYPLMLQLGSSLIEKDQT 829


>ref|XP_003519549.1| PREDICTED: conserved oligomeric Golgi complex subunit 5-like
           [Glycine max]
          Length = 831

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   EDQIWKGIKATLDDYAVKVRSRGDKEFSPVYPLMLRLGSSISETAQS 141
           EDQIWKGIKATLDDYA  VRSRGDKEFSPVYPLML+LGSS+ E  Q+
Sbjct: 781 EDQIWKGIKATLDDYAANVRSRGDKEFSPVYPLMLQLGSSLIEKDQT 827


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