BLASTX nr result

ID: Coptis21_contig00018892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018892
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|1...    84   1e-14
ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420...    83   3e-14
ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycin...    81   1e-13
gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]       80   1e-13
gb|AFK40617.1| unknown [Medicago truncatula]                           80   2e-13

>ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1|
           unknown [Populus trichocarpa]
           gi|222835239|gb|EEE73674.1| predicted protein [Populus
           trichocarpa]
          Length = 239

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -2

Query: 187 IGIGSIRSFCEDVTYLPVIRDPNIENVFKDLMDTSWDDLSDAIIDDAKNALSKNTKDRTG 8
           + +GS RSF EDVT+ P I+DP I NVFKDLM T+WD+L +A++ DAK ALSKNT D+ G
Sbjct: 63  MSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTDDKVG 122

Query: 7   RE 2
           +E
Sbjct: 123 QE 124


>ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis
           vinifera] gi|147811478|emb|CAN63226.1| hypothetical
           protein VITISV_002665 [Vitis vinifera]
           gi|302142337|emb|CBI19540.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/62 (59%), Positives = 47/62 (75%)
 Frame = -2

Query: 187 IGIGSIRSFCEDVTYLPVIRDPNIENVFKDLMDTSWDDLSDAIIDDAKNALSKNTKDRTG 8
           + IGS RSF EDV++LPVI+DP I+ VFKDLM  SWD+L D++I  A   LSKNT D+ G
Sbjct: 65  VSIGSTRSFSEDVSHLPVIKDPEIQTVFKDLMAASWDELPDSVISSANKVLSKNTDDKAG 124

Query: 7   RE 2
           +E
Sbjct: 125 QE 126


>ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycine max]
           gi|255632117|gb|ACU16411.1| unknown [Glycine max]
          Length = 225

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = -2

Query: 187 IGIGSIRSFCEDVTYLPVIRDPNIENVFKDLMDTSWDDLSDAIIDDAKNALSKNTKDRTG 8
           +G+GS+R + EDVT++P I+DP + N FKDLM  SW +L D++I D KNALSKNT D+ G
Sbjct: 49  MGLGSMRFYSEDVTHMPNIKDPVLYNAFKDLMAVSWSELPDSVISDVKNALSKNTDDKAG 108

Query: 7   RE 2
           +E
Sbjct: 109 KE 110


>gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 239

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = -2

Query: 187 IGIGSIRSFCEDVTYLPVIRDPNIENVFKDLMDTSWDDLSDAIIDDAKNALSKNTKDRTG 8
           + +GS R F EDVT+ P I+DP I NVFKDLM T+WD+L +A++ DAK ALSKNT D+ G
Sbjct: 63  MSLGSSRFFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTDDKAG 122

Query: 7   RE 2
           ++
Sbjct: 123 QD 124


>gb|AFK40617.1| unknown [Medicago truncatula]
          Length = 238

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/61 (55%), Positives = 50/61 (81%)
 Frame = -2

Query: 184 GIGSIRSFCEDVTYLPVIRDPNIENVFKDLMDTSWDDLSDAIIDDAKNALSKNTKDRTGR 5
           GIGS+R + E+VT++P I+DP + +VFKDL+  +W DLSDA++ DAK+ALSK+T+D  G+
Sbjct: 63  GIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSKSTEDEAGK 122

Query: 4   E 2
           E
Sbjct: 123 E 123


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