BLASTX nr result

ID: Coptis21_contig00018884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018884
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534314.1| conserved hypothetical protein [Ricinus comm...   105   4e-21
dbj|BAC43153.1| unknown protein [Arabidopsis thaliana]                101   6e-20
gb|AAM64738.1| unknown [Arabidopsis thaliana]                         101   6e-20
ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thali...   101   6e-20
ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arab...   100   2e-19

>ref|XP_002534314.1| conserved hypothetical protein [Ricinus communis]
           gi|223525515|gb|EEF28070.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +3

Query: 3   VVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQ 182
           VVIPLHQLKAVNPS S+ N AEKY+QVISVDNHEFWFMGF+NYD AVK LQD LQA  LQ
Sbjct: 252 VVIPLHQLKAVNPSSSRTNPAEKYVQVISVDNHEFWFMGFLNYDGAVKCLQDGLQAHSLQ 311

Query: 183 SV 188
           SV
Sbjct: 312 SV 313


>dbj|BAC43153.1| unknown protein [Arabidopsis thaliana]
          Length = 299

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +3

Query: 3   VVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQ 182
           VVIPLHQLKAVNPS S VN AEKYIQVISVDNHEFWFMGF+NYD AV  LQD+LQA  L+
Sbjct: 238 VVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSLQAGALR 297

Query: 183 SV 188
           SV
Sbjct: 298 SV 299


>gb|AAM64738.1| unknown [Arabidopsis thaliana]
          Length = 299

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +3

Query: 3   VVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQ 182
           VVIPLHQLKAVNPS S VN AEKYIQVISVDNHEFWFMGF+NYD AV  LQD+LQA  L+
Sbjct: 238 VVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSLQAGALR 297

Query: 183 SV 188
           SV
Sbjct: 298 SV 299


>ref|NP_565538.1| GLABRA2 expression modulator [Arabidopsis thaliana]
           gi|75160436|sp|Q8S8F8.1|GEM_ARATH RecName: Full=GLABRA2
           expression modulator gi|20197888|gb|AAM15301.1|
           Expressed protein [Arabidopsis thaliana]
           gi|145076288|gb|ABP35534.1| GL2 expression modulator
           [Arabidopsis thaliana] gi|330252217|gb|AEC07311.1|
           GLABRA2 expression modulator [Arabidopsis thaliana]
          Length = 299

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +3

Query: 3   VVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQ 182
           VVIPLHQLKAVNPS S VN AEKYIQVISVDNHEFWFMGF+NYD AV  LQD+LQA  L+
Sbjct: 238 VVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSLQAGALR 297

Query: 183 SV 188
           SV
Sbjct: 298 SV 299


>ref|XP_002878618.1| hypothetical protein ARALYDRAFT_481108 [Arabidopsis lyrata subsp.
           lyrata] gi|297324457|gb|EFH54877.1| hypothetical protein
           ARALYDRAFT_481108 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/62 (80%), Positives = 54/62 (87%)
 Frame = +3

Query: 3   VVIPLHQLKAVNPSISKVNRAEKYIQVISVDNHEFWFMGFVNYDSAVKYLQDALQARFLQ 182
           VVIPLHQLKAVNPS S VN AEKYIQVISVDNHEFWFMGF+NY+ AV  LQD+LQA  L+
Sbjct: 230 VVIPLHQLKAVNPSTSIVNPAEKYIQVISVDNHEFWFMGFLNYEGAVTSLQDSLQAGALR 289

Query: 183 SV 188
           SV
Sbjct: 290 SV 291


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