BLASTX nr result

ID: Coptis21_contig00018880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018880
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...   122   2e-26
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...   122   4e-26
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...   121   5e-26
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...   120   1e-25
ref|XP_002332297.1| cc-nbs resistance protein [Populus trichocar...   118   6e-25

>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/121 (50%), Positives = 84/121 (69%)
 Frame = -2

Query: 363 SIVSMLLSETSHQDSHVPLISVVGTAGFGKTTLVQLIFKDVLVTNNFEKLMWVCVSKPFD 184
           +++S L+ E+S +   V +IS+VG  G GKTTL QL F D  VT +FEK +WVCVS+PFD
Sbjct: 181 TVISKLVGESSQEARDVDVISLVGLGGIGKTTLAQLAFNDAEVTTHFEKKIWVCVSEPFD 240

Query: 183 LQRVAKSIIKEATGNVPPSTVAWQDLHRSLSESVRGKKFLLVLDDVWTYDREIWRKLKVS 4
             R+AK+I+++  G   P  V  Q L + +SES++GK+FLLVLDDVWT +   W +LK S
Sbjct: 241 QVRIAKAILEQLEGRA-PDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQLKPS 299

Query: 3   L 1
           L
Sbjct: 300 L 300


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/121 (52%), Positives = 86/121 (71%)
 Frame = -2

Query: 363 SIVSMLLSETSHQDSHVPLISVVGTAGFGKTTLVQLIFKDVLVTNNFEKLMWVCVSKPFD 184
           ++VS LL+E+S +   V +IS+VG  G GKTTL QL F D  VT +FEK +WVCVS PFD
Sbjct: 90  NVVSKLLAESSQKARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSDPFD 149

Query: 183 LQRVAKSIIKEATGNVPPSTVAWQDLHRSLSESVRGKKFLLVLDDVWTYDREIWRKLKVS 4
             ++AK+I+++  G+  P+ V  Q L + +SES++GK+FLLVLDDVWT +   W KLK S
Sbjct: 150 EVKIAKAILEQLEGSA-PNLVELQSLLQRVSESIKGKRFLLVLDDVWTENHGQWEKLKPS 208

Query: 3   L 1
           L
Sbjct: 209 L 209


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/121 (52%), Positives = 85/121 (70%)
 Frame = -2

Query: 363 SIVSMLLSETSHQDSHVPLISVVGTAGFGKTTLVQLIFKDVLVTNNFEKLMWVCVSKPFD 184
           ++VS LL+E+SH+   V +IS+VG  G GKTTL QL F D  VT +FEK +WVCVS+PFD
Sbjct: 181 NVVSKLLAESSHEARDVDVISLVGLGGIGKTTLAQLAFNDSEVTAHFEKKIWVCVSEPFD 240

Query: 183 LQRVAKSIIKEATGNVPPSTVAWQDLHRSLSESVRGKKFLLVLDDVWTYDREIWRKLKVS 4
             R+AK+I+++  G  P + V  Q L + +SES+ GK+ LLVLDDVWT +   W +LK S
Sbjct: 241 EIRIAKAILEQLEGR-PTNLVELQSLLQGVSESITGKRLLLVLDDVWTENHGQWEQLKPS 299

Query: 3   L 1
           L
Sbjct: 300 L 300


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/124 (51%), Positives = 83/124 (66%)
 Frame = -2

Query: 372 DIYSIVSMLLSETSHQDSHVPLISVVGTAGFGKTTLVQLIFKDVLVTNNFEKLMWVCVSK 193
           D  ++VS LL E+S +   V  IS+VG  G GKTTL QL F D  VT +FEK +WVCVS 
Sbjct: 147 DREALVSKLLGESSQEAWDVDAISLVGLGGIGKTTLAQLAFNDADVTAHFEKKIWVCVSD 206

Query: 192 PFDLQRVAKSIIKEATGNVPPSTVAWQDLHRSLSESVRGKKFLLVLDDVWTYDREIWRKL 13
           PFD  R+AK+I+++  G   P  V  Q L + +SES++GK+FLLVLDDVWT +   W +L
Sbjct: 207 PFDEVRIAKAILEQLEGRA-PDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQL 265

Query: 12  KVSL 1
           K SL
Sbjct: 266 KPSL 269


>ref|XP_002332297.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832459|gb|EEE70936.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 571

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/121 (51%), Positives = 81/121 (66%)
 Frame = -2

Query: 363 SIVSMLLSETSHQDSHVPLISVVGTAGFGKTTLVQLIFKDVLVTNNFEKLMWVCVSKPFD 184
           ++VS LL E+  +   V  IS+VG  G GKTTL QL F D  VT +FEK +WVCVS PFD
Sbjct: 181 AVVSKLLGESRQEAWDVYAISLVGLGGIGKTTLAQLAFNDAEVTAHFEKKIWVCVSDPFD 240

Query: 183 LQRVAKSIIKEATGNVPPSTVAWQDLHRSLSESVRGKKFLLVLDDVWTYDREIWRKLKVS 4
             R+AK+I+++  G   P  V  Q L + +SES++GK+FLLVLDDVWT +   W +LK S
Sbjct: 241 EVRIAKAILEQLEGRA-PDLVELQSLLQRVSESIKGKRFLLVLDDVWTENHRQWEQLKPS 299

Query: 3   L 1
           L
Sbjct: 300 L 300


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