BLASTX nr result

ID: Coptis21_contig00018879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018879
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like...    91   1e-16
ref|XP_004148425.1| PREDICTED: GATA transcription factor 12-like...    91   1e-16

>ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|222865650|gb|EEF02781.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/73 (64%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   EYRPASSPTFMLTQHSNSHRKVLELRRQKEMXXXXXXXXXXXXXXXXXNAMYNVSN-GDD 178
           EYRPA+SPTFMLT+HSNSHRKVLELRRQKEM                 N ++ VSN GDD
Sbjct: 246 EYRPAASPTFMLTKHSNSHRKVLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDD 305

Query: 179 YLIHHHGGPDFRQ 217
           YLIH H GPDFRQ
Sbjct: 306 YLIHQHVGPDFRQ 318


>ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|222838294|gb|EEE76659.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/73 (64%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   EYRPASSPTFMLTQHSNSHRKVLELRRQKEMXXXXXXXXXXXXXXXXXNAMYNVSN-GDD 178
           EYRPA+SPTFMLT+HSNSHRKVLELRRQKEM                 N ++ VSN GDD
Sbjct: 190 EYRPAASPTFMLTKHSNSHRKVLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDD 249

Query: 179 YLIHHHGGPDFRQ 217
           YLIH H GPDFRQ
Sbjct: 250 YLIHQHVGPDFRQ 262


>ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|222854574|gb|EEE92121.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/73 (63%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2   EYRPASSPTFMLTQHSNSHRKVLELRRQKEMXXXXXXXXXXXXXXXXXNAMYNVSN-GDD 178
           EYRPA+SPTFMLT+HSNSHRKVLELRRQKEM                 N +++VSN GDD
Sbjct: 283 EYRPAASPTFMLTKHSNSHRKVLELRRQKEMVRAQQQHQHHQYLHHHQNMVFDVSNGGDD 342

Query: 179 YLIHHHGGPDFRQ 217
           YLIH H GPDFR+
Sbjct: 343 YLIHQHVGPDFRR 355


>ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like [Cucumis sativus]
          Length = 338

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = +2

Query: 2   EYRPASSPTFMLTQHSNSHRKVLELRRQKEMXXXXXXXXXXXXXXXXXNAMYNVSNGDDY 181
           EYRPA+SPTF+LT+HSNSHRKVLELRRQKE+                 + +++ SNGDDY
Sbjct: 265 EYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQQQPQHLLLDHRQDMIFDASNGDDY 324

Query: 182 LIHHHGGPDFRQ 217
           LIH H GPDFRQ
Sbjct: 325 LIHQHVGPDFRQ 336


>ref|XP_004148425.1| PREDICTED: GATA transcription factor 12-like [Cucumis sativus]
          Length = 336

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = +2

Query: 2   EYRPASSPTFMLTQHSNSHRKVLELRRQKEMXXXXXXXXXXXXXXXXXNAMYNVSNGDDY 181
           EYRPA+SPTF+LT+HSNSHRKVLELRRQKE+                 + +++ SNGDDY
Sbjct: 263 EYRPAASPTFVLTKHSNSHRKVLELRRQKEILRAQQQQPQHLLLDHRQDMIFDASNGDDY 322

Query: 182 LIHHHGGPDFRQ 217
           LIH H GPDFRQ
Sbjct: 323 LIHQHVGPDFRQ 334


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